Cynara cardunculus var. scolymus (artichoke): 112505837
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Entry
112505837 CDS
T05604
Name
(RefSeq) glucan endo-1,3-beta-glucosidase 6-like
KO
K19893
glucan endo-1,3-beta-glucosidase 5/6 [EC:
3.2.1.39
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00500
Starch and sucrose metabolism
ccav01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
112505837
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ccav00537
]
112505837
Enzymes [BR:
ccav01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.39 glucan endo-1,3-beta-D-glucosidase
112505837
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ccav00537
]
Enzymes
112505837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_17
X8
Motif
Other DBs
NCBI-GeneID:
112505837
NCBI-ProteinID:
XP_024965638
LinkDB
All DBs
Position
LG 2:complement(8919676..8922516)
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AA seq
482 aa
AA seq
DB search
MKNPYTTGVCRIFVLIPFLYWVESVNGIGANWGTQSSHPLPPETVVKMLVDNGIQKVKLF
DADYGALRALSKSRIEVMVGIPNDLLATMATSTKAAEKWVSKNVSTHLSNSVNIRYVAVG
NEPFLATYNGSFLRTTFPALQNIQTALVKAGLANRVKVTVPQNADVYESSTGVPSGGDFR
ADIHDYIFQITKFLNDNGSPFTVNIYPFISLYIDSNFPVEYAFFDGQATPVNDGGTTYTN
MFDANYDTLVWALQKNGLPNMGIIVGEIGWPSDGDRNGNNEYAQRFMQGFMTRTAGGKGT
PMRQGPIEAYLFSLIDEDEKSIQPGNFERHWGVFYYDGQPKYSLNLGTTTTGALVPARDL
KYLQRKWCVLKDSAKMDDPSISQSVSYACALGDCTSLGYGTSCGGLDAQQNISYAFNSYY
QKNNQLDEACKFPNVSTVTKDDPSTGTCRFGIMIEPYYSGAHKLLGSGGYVAGLALLLLT
VL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatccttacacaacaggggtatgccgaatttttgtgttgattccattcctgtat
tgggttgaatccgtgaatggaataggggctaattggggaacacagtcatctcacccactg
cctccagaaacagtggtgaagatgctggtggataatgggatccaaaaggtgaagcttttt
gatgctgattatggtgcattaagagctctgagtaagtctagaattgaagtcatggttgga
atccctaatgacttgcttgccaccatggctactagcaccaaagctgctgagaaatgggtc
tcaaaaaacgtttcaacccatctgtcaaatagtgtcaacatcagatatgtggctgtgggg
aatgaaccgttcttggcaacgtataatggttcctttttaagaaccacttttccggctctt
caaaacatccaaaccgctctcgtaaaagccggacttgcgaacagagttaaagtcaccgtc
ccacagaatgcagacgtctacgagagctcgactggggtcccgtcgggcggcgatttccga
gccgacatccatgactatatcttccaaatcaccaagttcttgaatgacaatgggtcgccc
ttcacagtcaacatctacccattcataagtctttatatcgactcgaacttccccgtggag
tatgctttcttcgatggtcaggcaaccccggtaaacgatggtgggacaacctacaccaac
atgtttgatgccaattacgataccctcgtgtgggccctccagaaaaacgggttgccaaat
atgggaatcatagtgggagaaatcgggtggccaagtgatggcgatcgaaatggtaataac
gagtatgctcaacggttcatgcaagggttcatgactcgaacggctggcgggaaagggacg
ccgatgagacagggaccgattgaagcatatctattcagtttaatcgatgaagacgaaaag
agcattcagcccgggaacttcgaacgacattggggagtgttttactacgacgggcaaccg
aaatactcattgaacctcggaacaaccaccaccggagctcttgttccggcccgggactta
aagtatttacagagaaagtggtgtgtgttgaaggattcagctaagatggacgacccctct
atatctcagtcagtgagttacgcatgtgcactcggcgattgcacgagtcttgggtacgga
acttcttgtggcggtttagatgcccaacagaacatttcgtatgctttcaacagttattac
cagaaaaacaatcagctcgatgaggcttgtaagttccctaatgtttcaaccgtcacgaaa
gatgacccttcgactgggacctgcaggtttgggatcatgatcgagccatattacagtggc
gctcataaactgctcggttcaggtgggtacgttgcaggactggctttgttgttacttacg
gtcctgtaa
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