KEGG   Cynara cardunculus var. scolymus (artichoke): 112512524Help
Entry
112512524         CDS       T05604                                 

Definition
(RefSeq) succinate dehydrogenase [ubiquinone] flavoprotein subunit 1, mitochondrial
  KO
K00234  succinate dehydrogenase (ubiquinone) flavoprotein subunit [EC:1.3.5.1]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00020  Citrate cycle (TCA cycle)
ccav00190  Oxidative phosphorylation
ccav01100  Metabolic pathways
ccav01110  Biosynthesis of secondary metabolites
ccav01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    112512524
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    112512524
Enzymes [BR:ccav01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.5  With a quinone or related compound as acceptor
    1.3.5.1  succinate dehydrogenase
     112512524
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: FAD_binding_2 Succ_DH_flav_C Pyr_redox_2 Thi4 FAD_binding_3 GIDA DAO HI0933_like Lycopene_cycl
Motif
Other DBs
NCBI-GeneID: 112512524
NCBI-ProteinID: XP_024974297
LinkDB All DBs
Position
LG 5
AA seq 629 aa AA seqDB search
MWRSVSRGLRIPSRRSISGHSISQRFFSSQSNTGRSSYTIVDHTYDAVVVGAGGAGLRAA
IGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQD
AIQYMCREAPKAVIELENYGLPFSRTEEGKIYQRAFGGQSLDFGKGGQAYRCACAADRTG
HALLHTLYGQAMKHNTQFFVEYFALDLLMGSDGSCQGVIALNMEDGTLHRFRSSSTILAT
GGYGRTYFSATSAHTCTGDGNAMVARAGLPLEDLEFVQFHPTGIYGAGCLITEGSRGEGG
ILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPMKDHIYLHLNHLPPEVL
KERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVITIKGDDPDAVIPGL
MAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEIRRPGEKQKPLEKDAGEKTLAW
LDKIRNSNGSLPTSKIRLNMQRIMQNNAAVFRTQETLEEGCNLIDKAWESFHDVELKDRS
LIWNSDLIETIELENLLINACITMHSAEARKESRGAHAREDFSKRDDEKWMKHTLGYWEN
EKVRLDYRPVHMNTLDDEVETFPPKARVY
NT seq 1890 nt NT seq  +upstreamnt  +downstreamnt
atgtggcggtctgtgtcacgtggccttcgcattccatcccggagatccatctccggccac
tctatttcacaaagattcttctcttcccaatcgaatacagggcggtcatcgtatactatt
gtagatcatacatatgacgctgttgtggtcggggcaggaggggctggacttcgagctgct
atagggctctctgagcatggatttaatactgcttgcattaccaaactatttccaacacgt
tcacatactgttgctgctcaggggggtataaatgctgctttaggaaacatgactgaggat
gactggaggtggcacatgtatgacacagtgaagggaagcgattggttaggtgatcaggac
gctatccagtatatgtgtagagaagcaccaaaagcagttatcgagcttgagaattatgga
ctaccattttctcgaactgaagaaggaaaaatatatcaacgtgcatttggtggtcagagt
cttgactttggcaaaggtggacaagcttatcgatgtgcatgtgctgctgatagaactggg
catgcactgttgcatacgttgtatggtcaggccatgaaacataatacacagtttttcgtt
gaatattttgctttggatctactcatgggcagtgatggcagctgccaaggagttattgca
ctgaacatggaggatgggacattgcatcgatttcgttcttcttctacaatcctggcaact
gggggctatggtagaacatatttctcagcaacctctgctcatacttgcacaggagatgga
aatgctatggttgcacgtgcaggcctacctcttgaggatcttgagtttgtacaatttcat
ccaactggtatatatggtgctggctgcctcattactgaaggatctcgtggtgagggtggt
attttaaggaacagtgaaggggagcgatttatggaacgttatgcccccacagccaaggat
cttgcatcaagagatgttgtgtcaaggtcaatgacaatggaaatccgagaaggtcgcggt
gtaggacccatgaaggatcacatttaccttcacttgaatcacttaccgccggaagttctc
aaggagagacttcctggtatttctgaaaccgctgccatctttgctggcgttgatgtcaca
aaggagccaattccagttttacctaccgtgcattataacatgggtggtattccaacaaat
tatcatggggaggttattaccattaaaggtgatgatcctgatgcagttattcctggactg
atggctgctggagaggcagcatgtgcctccgttcatggtgccaatcggcttggtgcaaat
tcccttcttgacatagttgtttttggtcgagcctgtgcaaatagagttgcagagatccgt
aggccaggtgagaagcaaaaaccattagaaaaggatgccggagagaagactcttgcatgg
ttagataagattaggaattcaaatggttcacttcctacctcaaagatcagattgaacatg
cagcggataatgcaaaataatgctgctgtttttcggactcaggagacattagaagaaggt
tgcaacttgattgacaaagcatgggagagctttcatgatgttgagttgaaggacagaagc
ttgatatggaactcggacttgatagaaactatagagttggaaaacctcttgatcaatgca
tgtatcaccatgcattcggccgaagctaggaaagagagtagaggagctcatgcccgtgaa
gacttttcgaaaagagatgacgaaaagtggatgaagcacacacttggatactgggagaac
gagaaggtgcgactagactacaggccggttcacatgaacactctggatgacgaggttgag
actttccctccaaaggctcgcgtatactaa

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