Cynara cardunculus var. scolymus (artichoke): 112515874
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Entry
112515874 CDS
T05604
Name
(RefSeq) ABC transporter B family member 19
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
112515874
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112515874
04147 Exosome [BR:
ccav04147
]
112515874
04090 CD molecules [BR:
ccav04090
]
112515874
Enzymes [BR:
ccav01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
112515874
Transporters [BR:
ccav02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
112515874
Exosome [BR:
ccav04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112515874
CD molecules [BR:
ccav04090
]
Proteins
112515874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_29
AAA_22
Zeta_toxin
AAA_21
AAA_15
nSTAND1
DUF87
Glyco_transf_22
Motif
Other DBs
NCBI-GeneID:
112515874
NCBI-ProteinID:
XP_024978594
LinkDB
All DBs
Position
LG 7:complement(1681544..1694654)
Genome browser
AA seq
1251 aa
AA seq
DB search
MAEMAEATKAMPAPAEKKKEQSVPFYQLFSFADKFDYVLMILGSIGAIIHGSSMPFFFLL
FGQMVNGFGKNQSDLSTMTHEVSKYALYFVYLGLVVCVSSYAEIGCWMYTGERQVSALRK
RYLESVLKQDVGFYDTDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGF
VSAWKLALLSVAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYV
GETKVLDSYSDAIQHTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRSGQTDG
GKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLLEIIKQKPTIVQDSTDGKCLTEV
NGNIEFKEISFSYPSRPDVFIFRDFSIFFPAGKTVAVVGGSGSGKSTVVSLIERFYDPNQ
GQILLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPDATTAEVEAATSAAN
AHSFITLLPNGYHTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDSGSESI
VQEALDRLMIGRTTVVVAHRLSTIRNVDSIAVIQQGQIVETGTHEELISKPGAYASLIRF
QEMVGNRDFSNPSTHRTRSSRLSHSLSTKSLSLRSGSLRNLSYQYSTGADGRIEMISNAE
TDRKNPAPSGYFFRLLKMNSPEWPYSLMGAVGSILSGFIGPTFAIVMSNMIEVFYFNNPA
RMERKTKEYVFIYVGAGLYAVVAYLIQHYFFSIMGENLTTRVRRMMLSAIMRNEVGWFDE
EEHNSSLVAARLATDAADVKSAIAERISVILQNMTSLLTSFVVAFIVEWRVSLLILGTFP
LLVLAHFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQDKILSLFSAELRV
PQKQSLRRSQFSGMLFGISQLTLFASEALILWYGAHLVSEGLSTFSKVIKVFIVLVITAN
SVAETVSLAPEIIRGGEAIGSVFSILDRSTRIDPDDPDADPVETIRGEIELRRVDFSYPS
RPDVIVFKDFSLRIRAGQSQALVGASGSGKSSVIALIERFYDPTAGKVMIDGKDIRRLNL
KSLRLKIGLVQQEPALFAASIMENISYGKDGATEAEVIQAATAANVHTFVSGLPEGYNTP
VGERGVQLSGGQKQRIAIARAILKNPTILLLDEATSALDAESECVLQEALERLMRGRTTV
VIAHRLSTIRGVDNIGVVQDGRIVEQGSHGELISRPEGAYSRLLQLQQHRV
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atggcggagatggcggaggcgacgaaggcaatgccagcgccggcagagaagaagaaggaa
caaagtgtaccgttctaccagctgttctcattcgcagataagttcgattacgtgctcatg
attctcggtagcatcggcgccatcattcacggatcttccatgccttttttcttccttttg
ttcggtcaaatggtgaatggtttcgggaaaaatcaatccgatttgagtacaatgactcat
gaagtctctaagtatgctctgtattttgtctatcttggattggtcgtgtgcgtatcgtct
tacgcagaaatcggatgttggatgtataccggagaacgacaagtaagcgcgttgaggaag
aggtatttggaatcagttttgaaacaggacgtcggattttacgacacggatgcaaggacg
ggagatatagtttttagcgtctccacggatacactccttgtccaggacgccattagcgag
aaggtgggaaactttatccattatctctcaacatttttggctggattggtggttggtttc
gtgtcggcatggaagctagctcttctaagtgttgcagtgatcccaggaattgcctttgcg
ggtggcctatatgcatatactcttacaggtctcacttccaagagccgtgaatcctatgcg
aatgctggcatcatcgccgagcaggctattgcgcaagtaagaacggtgtactcatatgtc
ggcgagaccaaggttctggactcatattcagatgcaatacaacacaccctcaaacttggc
tataaggccgggatggcaaaaggtttgggactaggatgtacgtatggaatcgcatgcatg
tcttgggcacttgttttctggtatgccggtgtgtttattaggagcggacagacagatggc
ggaaaggctttcaccgccattttctccgccattgttggtggcatgagtttgggtcagtct
ttttcaaatcttggagcattcagcaaaggaaaagctgctggatataagttattggaaatt
attaagcaaaaaccgactatagttcaggattctacagacgggaagtgcttgacggaggtc
aatggaaatatcgagttcaaggaaatctctttcagttacccttcaaggccagatgtattt
atctttagagatttctccattttcttcccggctggaaagacggttgcagtcgttggaggt
agcgggtctggtaaaagcactgttgtttccctgatagaaaggttctatgaccctaatcaa
gggcaaatattgctagataatgtggacattaagactctgcaactacgatggttgcgtgat
caaattggtcttgtgaaccaagaacctgcactctttgccactacgatacttgaaaacata
ctttatggaaaaccagatgcaactacagctgaagtcgaagctgcgacctctgctgccaat
gctcatagcttcatcaccttgcttcctaatggctatcacacccaggttggggagagagga
gttcagctatccggtggtcaaaaacagagaatcgcgattgctagagcaatgttgaaaaat
cccaaaatcctcctccttgatgaggcaaccagtgcccttgattcgggttctgagagcatc
gttcaagaagctcttgatcgtctaatgatcggaaggacaactgttgtggttgcacatcgt
ctctctactataagaaacgttgattcaatcgcagtcattcaacaaggccagatcgtggag
actggaacccacgaagagctgatttcaaaacccggggcatacgcttccttaattcgattc
caagaaatggtgggaaaccgagacttctcaaatccttcgacccaccgtacacgttcatca
cgattgagtcattcattgtcaacaaaatctcttagcctccggtctggaagcttaagaaac
ttaagctatcagtacagcaccggtgcagatggtcgtatagaaatgatttcaaatgctgaa
accgatagaaaaaatccagctccgagtgggtatttcttccgtcttctgaagatgaattct
cccgagtggccttattccttaatgggtgctgtcggctcgattctatctggatttatcggt
ccaactttcgccatcgtgatgagcaatatgattgaagttttttatttcaacaaccccgct
cgcatggagagaaagaccaaagagtacgttttcatctacgttggagcaggtctatatgcc
gttgttgcatacttgatccagcattacttctttagtatcatgggagagaaccttaccaca
agagtaagaaggatgatgctttcagcgatcatgagaaatgaagttggatggttcgatgaa
gaggagcataactctagtctagttgcggctcggctagcaacagatgcagcagacgtgaaa
tccgccatagccgagaggatctcggttatattacagaacatgacatctcttctcacttca
tttgtagttgcattcattgtggaatggagggtctcacttctcattcttggcaccttccct
cttcttgtccttgcccattttgctcagcaactttctctcaaaggtttcgccggagacaca
gcaaaggcgcatgccaaaacgagcatgattgcaggtgaaggagtaagcaacattcggacc
gtcgcagccttcaacgcccaagacaagatcctctctctattctccgccgaactccgtgtc
ccccagaaacaaagccttcgtcgaagccagttttctggcatgctcttcggtatctcccaa
ctcactctctttgcatccgaagccctaatcctctggtacggtgcccacctcgtttccgaa
ggtctttccaccttctcgaaagtcatcaaagtattcattgtcttggtcatcaccgcaaac
tcggtagctgaaacagtcagcctcgctccggagatcatccgaggcggtgaagccatcggc
tcggtcttttccattctcgatagatcaacacgaatcgaccccgatgatcccgatgccgat
cccgtcgaaacgattcgcggtgagatcgagctacgtcgtgttgacttctcgtacccgtca
cgtccggacgtcattgtttttaaggatttcagtcttagaatacgggctggccagagccaa
gctctggtcggtgctagcggttcagggaaaagctcggtcattgcattgatcgagcgtttc
tacgacccgaccgccggaaaagtcatgattgatggaaaagacatccggcggttgaatcta
aaatctctccgtttgaaaatcggactcgtccaacaagaacccgcgctatttgccgcaagc
ataatggagaacatctcgtacggaaaagacggagctaccgaggcagaagttatccaagcc
gcaaccgccgcaaacgtgcatacattcgttagcggtttaccagaagggtataacactccg
gtgggcgagagaggtgttcaactctcgggcggacaaaaacaaagaatcgcaatagcacga
gccattctcaaaaacccgacaattctacttctcgacgaagcaaccagcgctctagatgcc
gaatcagagtgcgtgctccaagaagcactcgaacggctcatgaggggtcgaactacggtg
gtgattgctcaccgcttatcaacgatccgaggcgtggacaatatcggtgtggtccaagat
ggtcgaatcgtcgaacaaggaagccatggtgagctaataagccgaccagaaggggcttac
tcgaggctgttgcagctacaacaacatcgcgtatga
DBGET
integrated database retrieval system
