Cynara cardunculus var. scolymus (artichoke): 112516651
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Entry
112516651 CDS
T05604
Name
(RefSeq) uncharacterized protein LOC112516651
KO
K02357
elongation factor Ts
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ccav03012
]
112516651
03029 Mitochondrial biogenesis [BR:
ccav03029
]
112516651
Translation factors [BR:
ccav03012
]
Eukaryotic type
Elongation factors
112516651
Prokaryotic type
112516651
Mitochondrial biogenesis [BR:
ccav03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
112516651
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_TS
S1
RNase_II_C_S1
CsrA
Motif
Other DBs
NCBI-GeneID:
112516651
NCBI-ProteinID:
XP_024979582
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All DBs
Position
LG 8:2586417..2593971
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AA seq
1077 aa
AA seq
DB search
MTPVIPSSTSSISLIPGCTFDTKTTNRLIRCCNLRRSSRRTLYAQDCVLPLSTSLRLFPH
IRTFGSHHKPRFGIASATGVDVDVAVEQADQPDSAVSEQDSVQTSETTASVDKSNAEESA
AKSKQRSRPARKSEMPPVKDEELVPGATFTGKVRSIQPFGAFVDFGAFTDGLVHVSRLSD
GYVKDVADVVSLGQEVKVKLVEANIETGRIALTMRESEPASGGDTSRPPQRTGQKSNQKR
TEGRKTTKFVKGQDLEGTVKNKTRSGAFITLPEGEEGFLPASEEADEGFGSIMGDGSSLE
IGQEVKVRVLRIARGQVTLTMKKDEDSKALDSKLQGTVFTATNPFLVAFRRNKDIASFLD
EREKVEDSTEISSVDQVDQESKEMVELKSDGDSDETVSSSVLVEDEKVETENESDSSGTD
PQASIEETEITSPEPDEDENVSITNEEQVQVPEETSGITSSSEQVDTPIIQENVIEDEKV
EPVSDEITPEEQVAIPEETSSITSSNEQVDAPVIEDVAEGGDEKIEPVSEETISVTSEEQ
VEIPEEANSITSSVEQVDAPVIQENVIEETQVGEVIESQIEEMETKVEVDAEIPVATPIE
DGNDVAATEQNGEASAPSPVEAATKATISAALVKQLREETGAGMMDCKRALSETEGDLVK
AQEYLRKKGLASADKKASRATAEGRIGSYVHDSRIGVLIEVNCETDFVSRGDIFKELVND
LAMQVAACPQVQVLVPEDVPEETIQKEKEIEMQKEDLLSKPEQFRAKIVEGRIKKRLDEL
ALLEQAYIKNDKVVVKDFVKSTIATIGENIKVNRFVRFNLGEGLEKRTQDFAAEVAAQTS
AKKVSAPTTEQQPAPTEAVGAATDEAPKAVISAALVKQLREETGAGMMDCKKALSETGGD
LEKAQEYLRKKGLSTADKKSSRLAAEGRIGSYIHDARIGVLIEVNCETDFVGRSEKFKEL
VDDLAMQVVACPKVEYVSIEDIPEHIVSKEKELEMQREDILSKPENIREKIVEGRVSKRL
GELTLLEQAYLKDDSVLVKDFVKQTVAAIGENIKVRRFVRFTLGESSESKSEESSES
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccgttatcccttcgtcaacaagcagtatctcgcttatccctggatgcaccttt
gatacaaaaacgaccaaccgtttgataagatgctgtaatttaagaagatcttcgagaaga
accctatatgctcaagattgtgtattgcctttatcgacatcccttagattatttccgcat
atcagaacgtttggctcacaccataaaccaagatttggaatagcatcagccaccggggtg
gatgtggatgtagctgtagaacaagctgaccagccagattccgctgtttcagaacaagat
tccgttcaaacgtcagaaacaacagcatccgttgataagtcgaatgctgaagagtccgct
gccaagtctaaacaacgatcacggcccgctagaaagagcgaaatgccgcctgtgaaagat
gaagaattggttcctggtgcgactttcaccggaaaagtaagatcaatccaaccatttgga
gcttttgtcgactttggagcttttacggacgggctggttcacgtttcacggttgagtgat
ggatacgtgaaggatgttgcagatgtcgtttctttaggacaagaggtaaaggtaaagttg
gtggaggctaatattgaaacgggccgaatagcattgaccatgcgcgaaagtgagcccgct
agcggtggtgacacatctagacctccccaaagaacgggtcaaaagtcaaaccagaagcga
accgaggggagaaaaacgacaaagtttgtgaagggccaagatcttgaggggacggtaaag
aataaaacaagatctggtgcgtttataactcttccagaaggggaagaaggatttttgccc
gcttcagaagaagcggatgaagggttcggaagtataatgggggatggttcgtcgctcgag
atcggtcaagaagtcaaagttcgagtcttgcgtattgcaagaggacaagtgaccttgact
atgaagaaagacgaagattctaaagctttagactccaagcttcaaggaaccgtgtttaca
gccacgaatcctttccttgtagcattccgtagaaacaaagatatcgcttcatttctggac
gagagggagaaagttgaggattcaaccgagattagcagtgttgaccaagttgaccaagaa
agtaaagaaatggttgaattgaaaagtgacggagattctgatgagactgtaagttcttcc
gtactagttgaagacgaaaaagtggaaaccgaaaacgaaagcgattctagtggaactgat
ccacaagcatccattgaagagacggaaattacttctcccgaaccagatgaggatgaaaac
gttagcattaccaacgaagagcaggtacaggtacccgaggagacaagtggcatcactagc
tcaagcgaacaagtcgatacccccataatccaggaaaacgtgatcgaagatgaaaaagtt
gaacctgtttctgacgaaattacccctgaagaacaagtagcgatacccgaggagacaagt
agtatcaccagctcaaacgaacaagtagatgcccctgtcatcgaggacgtagccgaaggt
ggagatgaaaaaatcgagcctgtttctgaagaaactattagcgttacgagtgaagagcaa
gtagagatacccgaggaggcaaatagtatcacgagctcggttgaacaagtagacgcccct
gtaatccaggaaaacgtgatcgaagaaactcaggtcggtgaagtcatcgagagtcaaatt
gaggaaatggaaacaaaagttgaagtagatgcggaaattccagttgccacgccaattgag
gacggaaatgatgtagctgccaccgagcaaaatggcgaagccagtgcaccttctcccgtg
gaagccgctactaaagcaacgatctccgcggctcttgtgaagcagctgcgtgaagaaaca
ggtgcaggtatgatggactgcaagagagccctctcggaaaccgaaggtgatctagtcaaa
gctcaggagtaccttcgaaagaagggcttggcaagcgccgacaaaaaagccagtcgggca
acggccgaaggtagaatcgggtcctacgttcacgatagccggataggcgtcctcatagaa
gtcaactgtgaaaccgatttcgtatcacgtggagatattttcaaagaattagtcaacgat
ttagcaatgcaagtggctgcgtgccctcaggttcaagttctcgtcccggaagatgttcct
gaagaaaccattcaaaaggagaaagaaatcgaaatgcaaaaagaagatcttttgtcgaaa
cccgagcagtttagggccaaaattgtcgagggacgaatcaagaagaggcttgatgagctg
gcgttgcttgagcaggcgtacattaagaacgataaggtggtggtcaaagattttgtaaag
tcaacgatcgcaacgatcggcgaaaacataaaagtcaacaggtttgtgagattcaacctc
ggagaaggcttggaaaagagaactcaagattttgctgccgaagttgctgcacaaacttcg
gcaaagaaggtctcggcaccaacgaccgagcagcagcctgcaccaaccgaagccgttggt
gccgccactgatgaggcaccgaaagctgtgatttcggcggcattggtgaagcaacttcgg
gaagaaaccggtgcaggtatgatggattgcaaaaaagccctttcggaaactggaggagac
ctcgagaaagctcaagaatatctccgaaagaaaggtctttcgactgccgacaagaaatca
agccgtctagcggccgaaggtaggatcggatcctacattcacgacgcccggatcggggtc
ctaatagaagtcaactgtgaaactgatttcgtgggcagaagtgaaaagttcaaagaattg
gtcgacgatttagctatgcaagtcgtggcgtgtccgaaagtggagtacgtttctatcgaa
gatatcccggaacacatcgtgagcaaagagaaagagctcgagatgcaacgagaggatatt
ttgtcgaaacccgagaacataagggagaaaatcgtggaagggagggtatcgaaaaggctc
ggagaactcacgcttcttgaacaagcgtatctaaaggacgatagcgtccttgtgaaggat
ttcgtgaagcaaacggttgcggccatcggtgagaacataaaggttcggaggtttgttcgg
tttacactcggtgagtcaagtgagtcgaagtcagaagaatcgtctgagtcttga
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