KEGG   Cynara cardunculus var. scolymus (artichoke): 112518024
Entry
112518024         CDS       T05604                                 
Name
(RefSeq) oligoribonuclease-like isoform X1
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    112518024
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccav03019]
    112518024
   03009 Ribosome biogenesis [BR:ccav03009]
    112518024
Messenger RNA biogenesis [BR:ccav03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     112518024
Ribosome biogenesis [BR:ccav03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    112518024
SSDB
Motif
Pfam: RNase_T Rv2179c-like LAP1_C
Other DBs
NCBI-GeneID: 112518024
NCBI-ProteinID: XP_024981301
LinkDB
Position
LG 9:complement(16880639..16891083)
AA seq 244 aa
MNELPNAFSLLELDVEDDNQQVASAANSTEETNGKAKEENDSLDYMKWNESDNYRLPLVW
IDLKMTGLNVQVDRILEIACVITDGKLRKSVEGPDLVIHQPKDCLDKMGEWCQDHHAASG
PICQQFIIGLTEKVIQSTVSEKEAEEQVIDFVKRHVSAYTPLLAGNSIYIDFMFLKKYMP
DLASLFSHVVVDVSSVKALCRLWFPKDKKNAPKKEKKHRAMDDIRESIAELKYYKEHVFK
SPES
NT seq 735 nt   +upstreamnt  +downstreamnt
atgaacgagctcccaaatgcattttctttgctggaattagatgtcgaggatgataatcag
caagtggcaagtgccgctaatagtacagaggaaaccaatgggaaagccaaagaagaaaat
gacagtcttgattacatgaaatggaatgaaagcgacaattacaggttgcccctcgtgtgg
attgacttaaaaatgaccggcttgaatgttcaagtagatagaatattggagattgcttgc
gtgattacagatgggaaattgaggaaatccgtagagggtcctgatttagtcattcatcaa
ccaaaagattgtctggataaaatgggagaatggtgccaagatcatcatgccgctagtggc
ccaatatgtcaacaatttataatagggttgactgagaaggtgatacaaagcaccgtcagc
gaaaaagaagctgaagagcaggtgatagattttgtgaagaggcatgttagtgcatatact
ccgttgcttgcgggaaattcgatctacatcgattttatgttcttgaagaagtacatgccg
gatttggcgagtcttttctcgcatgttgtggttgatgtcagcagtgtcaaggctttatgt
cggctctggttcccgaaagataagaagaatgctcctaaaaaggagaagaagcatagggcc
atggatgatatcagagaaagcatagcagagctcaaatactacaaagaacatgtgttcaaa
tcgccagagtcttaa

DBGET integrated database retrieval system