Cynara cardunculus var. scolymus (artichoke): 112522227
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Entry
112522227 CDS
T05604
Name
(RefSeq) uncharacterized protein LOC112522227 isoform X1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccav03016
]
112522227
03036 Chromosome and associated proteins [BR:
ccav03036
]
112522227
Enzymes [BR:
ccav01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
112522227
Transfer RNA biogenesis [BR:
ccav03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
112522227
Chromosome and associated proteins [BR:
ccav03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
112522227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
Motif
Other DBs
NCBI-GeneID:
112522227
NCBI-ProteinID:
XP_024987092
LinkDB
All DBs
Position
LG 11:16631862..16661711
Genome browser
AA seq
1795 aa
AA seq
DB search
MDSATSLMSSFRRIPPAAIPATLDCILASTTSPPSSLFFLLLDALPILSQEVTHGSEEIL
DDEHQNFIASYVGALCHLLKKPGFNAEALQNFIWSVLIPLMRLTQGYDCEIVDKAIASFL
DVVMETNAWGVVEGTMVPYFIKVVGLTMGMLQNEQFAFYKWNGQAQSPEGSTLISFESFP
LLMACHILASILDASVKGNLLWDICNVTLQMLSHSPEHRSCAITVFLPHLLKALVSENVF
EISVHGQKFLLSRKMFFAKIWKCCKNLFSMGPSERGDAYTVLSLYISNSSKSDGCEDDSV
NGDGTFDLRAEKEFWDEMKKGLVDKESIVRKQSLHVLKSTVTISQGKQHTSVLESISNDT
TSNSHGLTKRERWADKEAKSLGIESLCNSVGSDSSSRLKWGAFFLLYEMLEEYGTHLVEA
AWNYQMNLLLRIAHPSDNSIKPVGERHYLDPMETLEDMFDWLAVLWQRGLCHDNPQVRCL
IMQSVFGIEWKNHGNYAKFVPRDFVLGPFIQGLNDPVHHKEFGLKGAYSSRTIDGASTFL
QQYTVCLSEREQMTLLSNLASLVKIYSFGRAGLMSFAECVAAAAAAGVRTHSKNEVEQCD
EASSEMKSAVDSTYNDKATLLDVFRFIIESSKQHFNPNYRLKVCGKILDASASVMSSSDV
LLEPLLHFISSFPPDFLNYGGPLREKVQEWLRGYEKQASTSCIIDTKLMKKLNEFPRSFI
YHNHSGNDIVNYDDEDLEMWELKAKRWARALFLIVKEEHHLDSLLQFIRTHGNELCKKIG
YWEWLPVKYMILILGIAQELHEMKNRTVDSHAKRRTKGLLEVVDHAESMGGSVIIKKFTR
SFTFILEELVSYTNQSCSVFWSEEAGDTTLPSSIKGRLGGLSQRRLSSSNTTAVLQAITS
VKTLASISSYCSQFQEEEYLSSTSTLDVLWQLSWKIISCTPCTSETKAEIYLGAYEALHH
VLKSLVSMPSPSALALLTRPYNLSAPEAEVKPHMDYFVQIYIENINNLIEAGYLARARRA
ILIDWKWMCLESLLLIPKYALQRGVYIQNCDVFFSDAVIRRIFSDLVDSLENAGEGSVLP
MLRSVRLVLDFFALGHKGSAVSSCDGIDVQMMWHLVRCSWLLHVSCNKRRVAPIAALLSS
VLHDSVFSDMDMHESDDTPGPLKWFVEKILEEGTRSPRTIRLAALHLSGLWLSHPSAIKY
YMKELKLLTLYGSVAFDEDFEAEVTENHDARTEVSILSTSPDPELTEEFINTELYARVSV
AVMFNKLADLADMVGSKDEAESSHASLQSGKLFLLELFHSVVNDTDLAKELYKKYSATHR
RKVRAWQMICILSRFVDQEIVSEVMCHLHTALYRNNMPAVRQYLETFAIYVYLKFPSLVG
EQLVPMVRKYDMRTQALSSYVFIAANVILHATKNVQSRHLDELLPPIVPLLTSHHHSLRG
FTQLLVYQVLSKLLPALNSGSYGTVSLEKRCFMELKSFLEDNSDCARLRVSMEVHLDAFD
PYISVTPAGIFSNRVDDIEFECAHVSLLEHVIDFLNDVRKDLRCSMAKDATQLKNEQIHM
QDSESIDQSKEETTMKMQKDMSLDFQKKVIVSKHEMQDSHSSSLNSKDTYNSLLDVEKED
ELLDQTLRARSIAMEKLKAGRQQIILVASLIDRVPNLAGLARTCEVFKAASLVVDNANIL
QDKQFQLISVTAEKWVPIIEVPVSNVKGFLEKKKHEGYSIMGLEQTANSVALDQYVFPRK
TVLVLGREKEGIPVELIHMLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRSS
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atggattctgcaacttcacttatgtctagtttccgccgaattcctccggctgccattccg
gcgacgttggattgtatcttagcttccacaacttctcccccatcttcccttttctttctg
ctgcttgatgccctcccaatcctctcacaggaagttacacatggtagtgaagaaatcttg
gatgatgagcatcaaaattttattgcttcgtatgtgggtgcactttgtcaccttttgaag
aaaccagggtttaatgctgaagctttacagaatttcatctggagtgtgttaattccatta
atgaggttgacacagggttatgattgtgagatagttgacaaggccatagcttctttcttg
gatgttgtgatggaaacaaacgcctggggggttgtagaaggaaccatggttccctatttt
atcaaagtggttggtttgactatgggaatgcttcaaaatgaacaatttgctttttataag
tggaatggacaagctcagagtcctgaaggttccacattgatcagttttgagtcttttcca
ttgctcatggcatgccatatattagcatctattttagatgcgtctgtaaaaggtaacctg
ctttgggatatttgtaacgtgactttgcaaatgctttcacacagcccggaacatcggtct
tgtgcgatcactgttttccttccacaccttttaaaggctcttgtctctgaaaatgtgttt
gagatctcagttcatgggcaaaagtttctattatccaggaagatgttttttgctaaaatt
tggaaatgctgcaagaatttgttttcaatggggccttctgagagaggagatgcatacact
gtactttctttgtatatatctaattcctccaagagtgatggatgcgaggatgattccgtg
aatggagatggaacatttgacttaagggctgagaaagagttttgggatgagatgaagaaa
ggcttggtcgacaaggaaagtatagtgaggaagcaatcattacatgtgctgaagagtaca
gtaacaatcagccaggggaagcagcacactagtgttttagagtcaatatccaatgacaca
acttcaaactctcatggtttgacaaaaagggagcggtgggcagacaaggaagccaaatct
ctgggtatagagagcttatgcaattcagttggttctgattcaagcagtcggctgaaatgg
ggtgcatttttcctactgtatgaaatgcttgaggagtatggtactcatcttgttgaggct
gcatggaattaccagatgaacttgttgcttcgcatagcccatccttctgataattctata
aagcctgttggtgaaaggcattatcttgatccaatggaaacattagaagatatgtttgat
tggttagctgtattgtggcaacgaggcctttgccatgataatcctcaagtaaggtgcttg
atcatgcagtcagttttcgggatagaatggaagaaccatggaaattatgcgaaatttgtg
cctagagattttgtacttggtcccttcatacaagggctgaatgatcctgtacaccacaaa
gaatttggactaaaaggagcctactcttcaaggacaattgatggggctagcacatttttg
cagcaatataccgtttgccttagtgaaagggaacagatgacactgttgagcaatctagca
tctcttgtaaagatatactcttttggtcgagctgggctgatgagttttgctgaatgtgtt
gctgctgctgcggctgctggagttcggacacatagcaagaatgaagtggaacagtgtgat
gaagcttcctctgagatgaaatctgccgtagatagtacttacaatgataaagcgacattg
cttgatgttttcagatttatcattgagagcagcaaacaacattttaatcctaattatcgt
cttaaagtgtgtggaaagattctggatgctagtgcttcggtaatgtcctcatcagatgtg
ctgctcgagccccttctgcactttatttcatctttccctccggacttccttaactatggt
ggtccattaagagaaaaagtgcaggaatggcttcgaggttatgaaaagcaagcttctaca
tcttgcattattgataccaaactcatgaaaaagcttaatgaatttcccagaagctttata
tatcataatcactcagggaatgatattgtcaattatgatgatgaagacttggaaatgtgg
gagcttaaagcgaaaagatgggcaagggcactgttccttatagtcaaggaggagcatcat
ctggattctctattgcagtttattcgaacacatggcaatgagctctgcaagaagattggt
tactgggagtggttaccagtaaaatatatgattctcatcttgggtattgctcaagaactc
cacgaaatgaaaaacagaacagttgatagtcatgcaaaaagaagaaccaagggtttgctt
gaagtagtggatcatgcagagtctatgggtggttccgtgattattaagaagttcactaga
tccttcaccttcatattggaggagctggtgtcatataccaatcagtcatgttctgttttc
tggtctgaggaggctggggacacaactctgccttcatccattaaagggaggctaggaggg
cttagtcagcgacgattgtcatcttctaacacaacggctgtattgcaagctataacgtca
gtcaagactcttgcatctatctcttcgtattgttcacaatttcaagaagaagagtatttg
agttctacttctactctcgatgttctctggcaactctcctggaagattatatcttgcaca
ccatgtacctcagagactaaagcagaaatctacctaggagcatatgaagcattacatcat
gttctgaagtcactagtgtctatgccttctccttcagctttagctctattaacgagacca
tataacttatcagcaccagaagctgaagtcaaacctcatatggattactttgttcagata
tatatagagaacatcaataatctcattgaggcaggatatttggcacgcgcacggcgagca
atattaattgactggaagtggatgtgcctggaatctctactgttgataccaaagtatgct
cttcaaagaggagtttacatacagaattgcgacgttttcttctcagatgctgtgatcaga
aggatattcagtgatttagtcgacagccttgaaaatgctggtgaaggttctgttttgccc
atgctaagatctgtcagacttgtgttggacttttttgctttaggacacaaaggttcagct
gtttcctcatgtgatggcattgatgtccagatgatgtggcatttggttcgttgttcttgg
ctattacatgtcagctgtaacaaacgaagggttgcacctattgcagcacttttatcttcc
gttttgcatgattcagtcttcagtgatatggacatgcatgaatctgatgataccccaggg
cctttgaagtggttcgttgagaaaattctagaagaaggaacaagaagtccacgtactatt
cgtcttgcagcattacatttgtcagggctatggctctcacatcccagtgcaataaagtac
tacatgaaggagttgaagctgttgactctttatggttctgttgcattcgatgaggatttt
gaagctgaagtgactgaaaatcatgatgcaaggactgaagtatcaatcttatcaacaagt
cctgatccggagttaactgaggaattcatcaacacggagctttatgcaagggtgtctgtt
gctgttatgttcaacaagctagcagatttggctgatatggtgggctcaaaagatgaagct
gaaagcagtcacgcttccctgcaatctggcaaactgtttttgcttgagctcttccattct
gtggttaatgacactgaccttgcaaaggagttgtataaaaagtacagtgcgactcatagg
cggaaagttcgtgcttggcaaatgatttgtatattatcgcgatttgttgatcaagaaata
gtatctgaggttatgtgtcacttgcatacagccctttatagaaacaacatgcctgctgtt
cgacagtacttggaaacatttgcgatctatgtatatttaaagttcccatcactggttggt
gagcaattagtcccgatggttcgtaaatacgatatgagaactcaggctctctcatcgtat
gtatttatagcagctaatgtcattctgcatgcaactaaaaatgttcaatcaagacatttg
gatgaattgcttcctcccattgttccactgctgacctcacatcaccacagtttacgtggt
tttacccagttactagtataccaagttctttccaaattgttgcctgcccttaattcaggt
tcctatggaacagtgtccttagagaaaaggtgctttatggaattgaaatcgtttttagaa
gataattccgactgtgcacggttgcgagtatcaatggaagttcatcttgatgcttttgat
ccatacatatccgtaacaccagctggaattttcagtaaccgagttgatgacattgagttt
gaatgtgctcatgtgtctctcttagaacacgtgatcgactttctaaatgatgtcagaaaa
gacctcagatgctcaatggccaaggatgcaacacaactaaaaaatgagcagatacatatg
caagattctgaatcaattgatcaaagcaaagaggaaacgactatgaagatgcagaaagat
atgtcattagatttccagaaaaaagttattgtctccaaacatgagatgcaagattcgcat
tccagctccttaaacagcaaagacacttacaattcacttttggatgtggagaaggaagac
gagcttcttgatcagacactgagagcaagaagtattgctatggaaaaacttaaagcaggc
cgacaacaaattattcttgtagcttcactaattgatcgtgtgcctaaccttgctggattg
gcaaggacatgtgaggtctttaaagcagcaagtttagtcgttgacaatgcaaatattttg
caagacaagcagttccaacttatcagtgtaactgcagagaaatgggttcccataatagag
gtacctgtaagcaatgttaagggtttcttggagaagaagaagcatgaggggtattctatc
atgggtttagagcaaactgcaaacagtgttgctcttgatcaatatgtctttcccagaaag
acggttctggttcttggtcgagaaaaggagggtattccggtagagttgattcatatgctg
gatgcttgcatcgaaatcccccagttaggcgttgtaagatcgctcaacgtccatgtcagc
ggtgccatcgccctctgggagtatactcggcagcaaagatcatcatga
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integrated database retrieval system
