Cynara cardunculus var. scolymus (artichoke): 112522626
Help
Entry
112522626 CDS
T05604
Name
(RefSeq) CSC1-like protein At3g54510 isoform X1
KO
K21989
calcium permeable stress-gated cation channel
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccav02000
]
112522626
Transporters [BR:
ccav02000
]
Other transporters
Pores ion channels [TC:
1
]
112522626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
RSN1_TM
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
112522626
NCBI-ProteinID:
XP_024987642
LinkDB
All DBs
Position
LG 12:6935193..6951860
Genome browser
AA seq
646 aa
AA seq
DB search
MNAASLLASAAINIGLAVVVLCLFSILRKQHSNANIYYPRRLSLHHPISFDRSFTLQRFL
PSLDWIRDAVRVTEDEILSSSGLDALVVIRFFKFGIKFFVVCSVVGLMVLLPLNCSVSPG
LSSSSSSMNSFTISNIPRGSNRLWVHFSSLCFISLSGIYLLHKEYKAVLVKRVQQLRNLR
HQPSQVTVLVRQIPLCDEHKAFSCSVDHFFSKYHPHAYHSYQILYTAKHLEELPVAFVAF
RSRWDAALASQTQQHPNPLLWITQMAPEPRDVLWKNLSIPYKHLVLYRTGVFVAELLFTI
FFAIPVTAVQGIAQFEKLKKWFPPAMAVQLIPGLSSVITGYLPSVILSGFVYIVPYVMKV
MARVAGYVSRSEQEQKASSMVFYFLMGNVFFMSVLSGSLLDQIGKSFINPRDVPSRLAKA
VSVQGDFFMTYILTSGLSGFSLEILQPGLLTWDTMKLHTWGRGKKKTNYLYSFPYYRVLP
FVELFVLVGVVYAVIAPLLLPFLVVYFLLGYVVFINQMHDVYETTYETCGQYWPHIHHHV
VLAIIIMQITMIGLFGLKSKPSASIATIPLLVVTVAYNEYCKFRFLPTFYKCSVQDAKDN
DELDNDGPNDATCRKALDAYRPPSCHQAYVGTEESTSTQPLLSPTV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgcgagcttattagcatcggcggccatcaacataggccttgcagttgtcgtc
ctatgtctcttctccattttgcgaaaacagcattccaatgccaacatatactaccctcgt
cgtctctctcttcaccatccgatttcattcgatcgttccttcactcttcaacggttcctt
ccatcacttgattggatccgtgatgctgttagagttacggaggatgaaattctttctagt
tccggccttgatgcactcgttgtcataagattctttaaattcgggataaagttttttgtg
gtctgctctgtcgttggattgatggttcttctgccactcaactgttctgtctctcctggt
ctatcttcaagctcaagttccatgaactctttcacgatttccaatatccctagaggatcg
aacaggctttgggtccacttttcatcattatgttttatatctctttcgggaatatatcta
cttcacaaggaatacaaggctgtccttgtgaaaagagttcagcaactgcgtaatctgagg
catcaaccaagtcaagtcactgttctggttcgacaaattcctttatgtgatgaacacaag
gcatttagctgcagtgtagatcatttcttctccaaatatcaccctcatgcatatcattca
tatcagattctatacactgcaaagcatcttgaggagttgcccgttgcttttgtcgcattt
aggtctcgatgggatgctgcccttgcttcccaaacacagcagcatccaaatccattattg
tggatcactcagatggccccagaacctagagacgtgttgtggaagaatctgtcaatccct
tataagcatttggtactttacagaactggggtatttgtagcagaacttcttttcactata
ttctttgctattccagttactgcggtccaggggatagcacagttcgaaaagctgaagaag
tggttccctccagccatggctgtgcaattaataccaggattgagctccgttattacagga
tatcttccaagtgtcattcttagtgggtttgtatatattgtgccttatgttatgaaagta
atggcgagggtagcaggttacgtttcaagaagtgaacaggaacagaaggctagcagcatg
gttttctactttttgatgggcaacgtcttcttcatgagtgtgttatccggatctttgctt
gatcagatcgggaaatctttcatcaacccacgggatgtaccaagccggcttgcaaaggct
gtctctgtccaaggagacttctttatgacatacatcctgacgagtgggttgtctggattc
tctctggagattcttcagcctggattacttacttgggatactatgaaattgcatacatgg
ggccgaggaaaaaagaaaaccaattatctttattcgttcccttattatagagttcttccc
tttgtagaactctttgttcttgttggtgttgtatacgcagtcattgcaccattgcttctt
ccatttctagtcgtttacttccttctaggctatgtggtattcatcaatcagatgcacgat
gtgtatgaaactacatacgagacctgtggccagtattggccacacattcaccatcatgtt
gttctagccatcattatcatgcaaatcaccatgatcggtctctttggactgaagtcaaaa
ccctctgcatctatcgcaacaattccgctccttgttgtaaccgtagcttacaacgagtat
tgcaagttccgttttcttcctacattttacaaatgctctgtccaggatgccaaggataat
gatgaacttgacaatgatggtccaaacgacgctacttgccgcaaagcgttagatgcatac
cgtccaccttcttgccatcaagcatacgttggcacagaagaatcaacttcaacacaacca
ttactgtcaccgactgtgtag
DBGET
integrated database retrieval system
