Cynara cardunculus var. scolymus (artichoke): 112524533
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Entry
112524533 CDS
T05604
Name
(RefSeq) glycine--tRNA ligase, mitochondrial 1-like
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
ccav
Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccav00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112524533
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccav01007
]
112524533
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccav03016
]
112524533
03029 Mitochondrial biogenesis [BR:
ccav03029
]
112524533
Enzymes [BR:
ccav01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
112524533
Amino acid related enzymes [BR:
ccav01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
112524533
Transfer RNA biogenesis [BR:
ccav03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
112524533
Mitochondrial biogenesis [BR:
ccav03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
112524533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
112524533
NCBI-ProteinID:
XP_024990156
LinkDB
All DBs
Position
LG 13:40275928..40284169
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AA seq
726 aa
AA seq
DB search
MRSNPAVLSSYSLHRILLRFRHTLSSQRPAGFIIPMATTEDSLRQALADKQSTIDASGNA
IRQLKTSGASKSEIDDAVRALNALKLEKTSIENQLRASISGDANGSVVSRDAFRQAVVNT
LERRLFFIPSFKIYRGVAGLYDYGPPGCAIKSNVLAFWRQHFVLEEDMLEVDCPCVTPEV
VLKASGHVDKFTDLMVKDEKTGTCYRADHLLKDHCKDKLEKDLGISTEKAAELKHILAVL
DDLSAEELGAKIKEYGITAPDTKNPLSDPYPFNLMFQTSIGPSGLSAGYMRPETAQGIFV
NFKDLYYYNGNKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAEIEHFVDPDDKSHPKYS
EVANLKFLMFPRDEQMSGQSAKRLCLGDAVSRGIVNNQTLAYFIGRVYLFLTRLGIDEER
LRFRQHLPNEMAHYAADCWDAEIESSYGWIECVGIADRSAYDLRAHTDKSGVALVAQEKF
AEPKEVEKLVITPVKKELGLAFKGNQKMVVEALEAMNEKEAMDMKATLESKGEVEFEVCT
LQKTVTIKKNMVSISKEKKKEHQRVFTPSVIEPSFGIGRIIYCLYEHSFYMRPSKAGDEQ
LNVFRFPPLVAPIKCTVFPLVQNQQYEEVAKHISRSLTAAGISNKKDITGTSIGKRYART
DELGVPFAVTVDSTSSVTIRERDSKDQIRVSVEEVAAVVKDVSEGRSTWTDILKKYPAHT
SASADE
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcaaatcccgctgtgttatcgtcttactctctccaccgtatcctcctccgattc
cgccacacgctttcttctcaacgaccggccggcttcatcataccgatggccaccactgag
gattcactccgacaagctcttgccgacaaacaatccaccatcgacgctagcggcaacgcc
atacgtcaattgaagacttcgggcgcatcgaagtcggagatagatgatgccgttagagca
ctcaatgctttgaaacttgagaagacatcgatcgagaatcaactcagagcttccatttct
ggtgatgctaatggctctgttgttagcagggatgcgtttcggcaggccgttgttaatact
cttgaacgccggttgtttttcattccgtcgtttaagatttatagaggtgttgctggtttg
tatgattacggtcctcctggttgcgccatcaagtctaacgtcctcgctttctggcgtcag
cattttgttttggaggaggatatgctagaagttgattgtccttgtgtcacccctgaggtt
gttctgaaagcttctggtcacgttgataagtttactgaccttatggttaaagatgagaag
actggaacttgctaccgagccgatcacctgcttaaggatcattgtaaggataagcttgag
aaggacctgggtataagcactgagaaagctgctgaactgaaacatattcttgcggtcctg
gatgatctttcagctgaagaacttggtgccaagattaaggaatatggtataacagcacca
gacactaagaatcctctctcagatccttacccgttcaatcttatgtttcagacttcaatt
ggtccctctggcttgagcgcagggtacatgcgccctgaaacagcacaaggcatatttgtc
aacttcaaagacctatattattacaatgggaacaagctcccatttgcagctgctcaaatt
ggtcaagctttcagaaatgagatatctcctcgacaaggtcttctaagagtccgtgaattc
acacttgcagagatagagcacttcgtggatcctgatgacaaatcacatccaaagtattct
gaagttgcaaacttaaagtttctcatgtttccaagggatgaacagatgtcagggcagtct
gcgaaaaggctttgtcttggagatgcagtttctagggggattgttaataatcaaacactt
gcatacttcattgggagagtatatctgtttttgacacggctgggaatagatgaagaacga
ttgcgcttcagacagcatctcccaaatgagatggctcactatgccgcagactgttgggat
gctgaaattgagtcttcttatggttggattgagtgcgtagggattgctgatagatctgca
tatgatctgcgtgcacacacggataaaagtggagtagctctcgtagctcaagagaaattc
gcggaacccaaggaagtggagaaactggttataacacccgttaagaaggagcttggcctt
gcattcaagggtaaccaaaagatggtggttgaagcgctggaggcaatgaatgaaaaagag
gcgatggacatgaaggccactctagagtcgaaaggggaggtagagtttgaagtttgcact
cttcagaagacggttactataaagaaaaacatggtttcaatatcaaaggaaaagaagaaa
gaacaccagagagtttttacgccctctgtgatcgaaccttcatttggtattggacggatc
atctattgtctctatgagcattctttctacatgaggccaagcaaagctggggatgaacag
ctgaacgttttccgttttccccctcttgtggcccccatcaaatgcaccgttttcccgttg
gttcagaatcagcaatacgaggaagttgctaaacatatctccagatctctgactgcagcc
ggaatttcaaataagaaagatattacaggtacatcaatagggaaacgatatgcaagaaca
gatgaactaggcgtaccatttgctgtcaccgtggattcaacatcatcagtgacaattcgt
gaaagggatagcaaggatcaaatccgtgtgagtgtagaggaggtagccgccgtggtgaag
gatgtctccgaggggcggagcacatggaccgatatcttgaaaaaatacccagctcacact
tccgcctctgcagacgagtga
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