KEGG   Cynara cardunculus var. scolymus (artichoke): 112527124
Entry
112527124         CDS       T05604                                 
Name
(RefSeq) DNA repair endonuclease UVH1
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    112527124
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccav03032]
    112527124
   03400 DNA repair and recombination proteins [BR:ccav03400]
    112527124
DNA replication proteins [BR:ccav03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    112527124
DNA repair and recombination proteins [BR:ccav03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     112527124
SSDB
Motif
Pfam: ERCC4 CARD
Other DBs
NCBI-GeneID: 112527124
NCBI-ProteinID: XP_024993322
LinkDB
Position
LG 15:complement(18943712..18950295)
AA seq 977 aa
MVQFHEHIIADLLEEPSDGGGLVVLSSGLGMHKIITALLHLHHPSEGTLLILSASPSQKH
SILTSLNPNPNNEVTNSPSEITSDLQAHHRLSLYSSGNAFFITSRILIVDLLTRRLPTSA
VAGVVLLNAHSLSETCTEAFIVRILRSSNKNLYVRAFSDKPHAMVSGFAKAERTLKCLFL
RKLYLWPRFQVYVSEDLERYPPEVVDIRVPMSAYMVGIQKAVIEVMDACLKEMRKTNKVD
VEDLTVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLK
YLDSLRASESFRSVWIFAESSYKIFEYAKKRVYHFGMSNGENLTAPAKKSVKSKKRKLDD
SNKDQEDSLVKDANSRVILEEVLEEAPKWKVLREVLEEIEEERQKQATSIDECVVESAQD
DNGIVLVACKDEHSCVQLEECITSDPNKVMRGEWDKYLLSKVQLHALPKRNKKKPQNTKG
FGVLDGVLPLTPGKRVEGNSLVTQEHDALLAAATQLSKQAQKGIEIVDDPQNCEVKKGKG
KGSSKSRNKKSSRNASLKRGDGNKIEAALLKESEPSSKNDGKEVEINPASDHTTIGTSVL
KKHVEGADVEQPRNEKRIPPVHFYAYESGQQVLDVLKPSAIVVYHPDIAFVREIEIYKAE
NPTKKVKVYFLFYEDSTEVQKFEASIRRENGAFESLIRQKSMMMLPVDQVAHGLVRNSAS
ETDSPLKQNMVTRKAGGQKEADKEMQVIVDMREFMSSLPNVLHQKGMNIIPVTLEVGDYI
LSPMICVERKSIQDLFSSFASGRLYHQVEMMVRYYRMPVLLIEFSQDKSFSFQSTSEIGE
DVTPHNIISKLSLLVLHFPRLRIVWSRSLHATAEIFASLKTNQDEPDEVKATRVGVPSEE
GVVEDDVRAENYNTSAIEFLRRLPGVTDSNYRAIMDGCSSLAEVALLPVERLAELMGSQK
SAKILRDFLDAKYPTLL
NT seq 2934 nt   +upstreamnt  +downstreamnt
atggttcaatttcacgagcacataatcgccgatctccttgaagaacccagcgacggcggc
ggcctggttgttctctcttccggccttggtatgcacaaaattattactgctcttcttcac
ctgcaccacccatccgaaggtactcttcttatcctctctgcatccccatcccagaagcac
tccatcctcacctccctaaaccctaaccctaacaatgaagttaccaactcaccgtccgag
ataacttccgacctccaggcgcatcaccgtctttccctctactcctccgggaacgccttc
ttcatcacttctcgtatcctcatcgtcgatctcctcactcgccgcctccctacctctgcc
gtggccggggtcgtcctccttaatgcacattctttgtcggaaacttgtaccgaggctttc
attgtaaggattcttaggtcgtcgaataagaatctttatgttcgtgccttttcggacaag
ccccatgccatggtctctggtttcgctaaggctgagagaacgcttaagtgcttgtttctg
aggaaactctatctgtggcccaggtttcaggtatatgtatcagaagacctagagaggtat
ccaccagaagtagtggacatcagagtccccatgtctgcatacatggtggggattcagaaa
gcggtgatagaggtcatggatgcttgtttgaaagagatgaggaagactaacaaggttgat
gtggaggatttaactgtggagaatggtctgttcaagtcatttgatgagattgttaggcga
caattggatccaatttggcatacattggggaagaagactaagcagcttgtttcagatttg
aaaacgttgaggaagttgttggattatcttgttaggtatgatgcagtgacttatttaaag
tatttggattcgttgagagcatcagagagttttcgctctgtatggatatttgcagagtcc
agttataagatatttgagtatgcaaaaaaacgcgtttatcacttcgggatgtcaaacggt
gaaaatttgactgctccggctaagaagagcgtgaagtccaagaagaggaagttggatgat
agtaacaaggaccaagaagattctctggtaaaggatgccaatagtagggtaattttggag
gaagtcttggaggaggcaccaaagtggaaggtgttgcgtgaggttctcgaagaaatagaa
gaagaaagacagaagcaagctacatcaattgatgaatgtgttgttgaaagtgctcaagat
gataatggcattgttttggttgcctgtaaagacgaacactcttgtgttcagcttgaggag
tgtatcacgagcgacccaaacaaggtcatgcgaggagagtgggataaatatttgctgagc
aaagtgcagttgcatgccttaccaaagcgtaataagaagaaaccccaaaacactaaaggt
ttcggggtacttgacggagtgctccctttgacacctggaaagagagtagaaggcaatagt
ttagtaacacaagaacatgatgcattactagcagcagcaacccaattaagtaagcaagcc
cagaaaggtatagaaatagtggacgatcctcaaaattgtgaggtcaaaaaaggaaaggga
aaagggagttcgaaaagtagaaacaagaagtcctcaagaaatgcctccttaaagagagga
gatggaaacaaaattgaggcagcattgctaaaagaatctgagccctcttctaaaaatgat
ggcaaagaagttgaaattaatccagctagcgatcatacaacaattggcacaagtgttctc
aagaagcatgtagaaggggctgatgttgagcaaccgaggaatgaaaaacggattcctcca
gtgcatttttatgcctatgaaagtggtcagcaagtacttgacgttttgaagccatctgca
attgttgtttaccatcctgacatcgcctttgtacgagaaattgaaatatataaagctgaa
aatcccacaaagaaggtgaaagtatattttttgttttatgaagattctacagaagtgcaa
aagtttgaggctagtatacgccgcgaaaatggagcatttgaatccctgattaggcagaaa
tcgatgatgatgttgccagttgatcaggttgctcatggccttgttcgaaattctgctagt
gagacggactctccattgaagcaaaatatggtaactaggaaggcaggtggacagaaggaa
gccgacaaagagatgcaagtcatagtggatatgcgggagttcatgagcagccttcctaac
gttcttcatcaaaagggtatgaatataataccggttactctcgaagttggagattacatt
ttgtcaccgatgatatgtgtggaaagaaaaagcatacaagacctttttagtagttttgca
tcaggccgtctttaccaccaagttgaaatgatggtccgttattaccggatgcctgttctt
ttaatcgagttttcacaagacaaaagcttctcgtttcagtcaacgagtgagattggcgag
gatgtcacgccccataatattatatcgaagctatctttgcttgttctacattttcctcgt
ttgcgaattgtatggtcgcgtagcttgcatgcaactgcggaaatctttgcttctcttaaa
acaaatcaagacgaacctgatgaagttaaggcaacgagagttggagtaccttcagaagag
ggtgtcgtggaagatgacgtcagagctgagaattacaatacttctgccatcgagttcttg
aggcgactaccaggtgtgacggattccaactacagggccataatggacgggtgcagcagc
ttggcggaggttgccctccttccggtggagagactcgctgaactaatgggcagccagaaa
tccgccaagattctcagggacttcctcgatgccaagtatccgactttgctctga

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