KEGG   Cellulosimicrobium cellulans: CBR64_00560Help
Entry
CBR64_00560       CDS       T04858                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
cceu  Cellulosimicrobium cellulans
Pathway
cceu03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cceu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    CBR64_00560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cceu03400]
    CBR64_00560
Enzymes [BR:cceu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CBR64_00560
DNA repair and recombination proteins [BR:cceu03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     CBR64_00560
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M LigD_N DNA_ligase_A_C RNA_ligase DNA_ligase_OB_2
Motif
Other DBs
NCBI-ProteinID: ARU50225
UniProt: A0A1Y0HSD3
LinkDB All DBs
Position
110487..113084
Genome map
AA seq 865 aa AA seqDB search
MATSSSRGAGETVSVGGHRLRLTNLDKVLYPATGTTKADVLAYLAAVADVMLPHCAHRPA
TRKRWPDGVDGQVFFQKNAGQGVPSWVRTRRIQHKSSANDYVLVDDLATLTWLGQTASLE
LHVPQWQFGRTGVHLNPDRLVLDLDPGPGAGLAECAEVARLARQILQGMGLDPLPVTSGS
KGIHLYAALDGKQDAAAVSAVAHELARYLEAEHPDLVVSDMKKSLRGGKVLVDWSQNNGN
KTTIAPYSLRGREHPTVAAPRTWEELDDPDLRHLDKDEVVERVRTIGDPLAALTLGHLSA
LEPTPERMATFERKGAATSGGDDEPGASDAERPDRLHRYRSMRDAARTPEPVPDEAPPAS
EGNGFVIQEHHARRLHWDFRLEHDGVLVSWALPRGEPTDPKKNHLAVQTEDHPLAYGSFE
GTIPKGEYGAGEVTIWDAGTYELEKWRDGKEVIVTLHGEQHGTRRLALIHTGGRDGRDGR
ETANWLIHLMAPRGGTPGRSSGRGQDAAVEASAPPATPPDHDHAEPAPARTDWRPMLASP
ASAGDLHDGDDWAFEMKWDGFRALAHVSRGGVRLVSRSGKDMTVTYPELQALAEQVPAEA
LPVVLDGEIVALDARGRPSFRRLQQRANIAKPGDVAAARRKVTVGLMVFDVLETAGRSLA
KRPYDERREILEDVLGDARAPVHVPPAFDGDLDAAMETSRRLGLEGVVAKRRDGTYSSGR
RSALWLKLKHAQSQEVVVVGWRPGHGDRAHLMGSLLLAVPDGDRLVYVGRVGSGFTDAER
HDLVTELGRLERTTPPATGVPRDDARDARWVSPRRVAEVVYAEWTGPGEGDDVPFGKLRH
PVWKGWRRDKAPADVVREEPATLDR
NT seq 2598 nt NT seq  +upstreamnt  +downstreamnt
atggccacctcatcgagccgcggcgcgggcgagacggtgagcgtcggtggccaccgcctg
cggctcacgaacctcgacaaggtcctctaccccgccaccggcacgacgaaggcggacgtc
ctcgcctacctcgcggccgtcgccgacgtcatgctcccccactgcgcgcaccggcccgcg
acgcgcaagcgctggccggacggggtcgacgggcaggtgttcttccagaagaacgcgggg
cagggcgtgccgtcgtgggtgcgcacgcgccggatccagcacaagagcagcgccaacgac
tacgtgctcgtcgacgacctggccacgctcacgtggctcggccagacggcgtcgctcgag
ctgcacgtgccgcagtggcagttcggccgcaccggcgtccacctgaacccggaccggctc
gtgctcgacctggaccccgggccgggggccgggctggccgagtgcgcggaggtcgcgcgc
ctggcccggcagatcctgcagggcatggggctcgaccccctgcccgtgacgagcgggtcc
aaggggatccacctgtacgccgcgctcgacggcaagcaggacgccgcggccgtctccgcc
gtcgcgcacgagctcgcgcgctacctcgaggccgagcaccccgacctcgtcgtgagcgac
atgaagaagtcgctgcgcggcggcaaggtgctcgtcgactggagccagaacaacggcaac
aagacgaccatcgcgccgtactcgctgcgggggcgcgagcacccgaccgtcgccgcgccc
cgcacgtgggaggagctcgacgacccggacctgcgccacctcgacaaggacgaggtcgtc
gagcgcgtgcgcacgatcggcgacccgctcgccgctctcacgctcggccacctctccgcg
ctcgagcccacgcccgagcgcatggcgacgttcgagcgcaagggcgctgcgacgtcgggc
ggcgacgacgagcccggggcgagcgacgccgagcggcccgaccgcctgcaccgctaccgc
tcgatgcgcgacgccgcacggacgcccgagcccgtcccggacgaggcacccccggcgagc
gagggcaacggcttcgtcatccaggagcaccacgcccggcgcctgcactgggacttccgg
ctcgagcacgacggcgtcctcgtgagctgggcgctgccccgcggcgagccgacggacccg
aagaagaaccacctcgccgtccagaccgaggaccacccgctcgcgtacgggtcgttcgag
ggcacgatcccgaagggcgagtacggcgcgggcgaggtgacgatctgggacgccggcacg
tacgagctcgagaagtggcgggacggcaaggaggtcatcgtcaccctccacggcgagcag
cacggcacgcgccgcctcgcgctcatccacacgggcggccgcgacggtcgggacggccga
gagacagccaactggctcatccacctcatggccccgcgcggcggcaccccggggaggtcg
tcgggccgtggccaggacgcagcggtcgaggcgagcgccccacccgccaccccacccgac
cacgatcacgccgagccggccccagcgcggacggactggcgacccatgctcgcgtcgccc
gcgtcggcgggcgacctgcacgacggcgacgactgggcgttcgagatgaagtgggacggg
ttccgggcgctcgcgcacgtgtcccgaggcggggtgcggctcgtgagccgctcgggcaag
gacatgacggtgacgtacccggagctgcaggcgctcgccgagcaggtcccggccgaggcg
ctgcccgtcgtgctggacggcgagatcgtcgcgctcgacgcacgagggcgaccgagcttc
cggcggctgcagcagcgcgcgaacatcgccaagccgggggacgtcgcggcggcccggcgc
aaggtcacggtcggcctcatggtgttcgacgtcctggagaccgcgggccggtcgctcgcc
aaacgcccgtacgacgagcggcgcgagatcctcgaggacgtgctgggcgacgcgcgagcg
ccggtccacgtgccgcccgcgttcgacggcgacctcgacgcggcgatggagacgtcgcgg
cggctcggcctggagggggtcgtcgccaagcggcgcgacggcacgtactcgtcgggccgc
cgctcggcgctgtggctcaagctcaagcacgcgcagtcgcaggaggtggtcgtcgtcggg
tggcgcccgggtcacggcgaccgggcgcacctgatgggctcgctcctcctcgcggtgccc
gacggcgaccggctggtctacgtggggcgcgtcgggtcgggcttcacggacgcggagcgg
cacgacctcgtcacggagctcggccggctggagcgcacgacgccgcccgcgacgggcgtc
ccgcgcgacgacgcgcgcgacgcgcgctgggtgtcgccgcgccgggtcgccgaggtcgtc
tacgccgagtggacgggcccgggcgagggcgacgacgtcccgttcggcaagctgcggcac
cccgtgtggaaggggtggcggcgtgacaaggcgccggccgacgtcgtgcgcgaggagccc
gcgacgctcgaccggtga

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