Cellulosimicrobium cellulans: CBR64_01990
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Entry
CBR64_01990 CDS
T04858
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cceu
Cellulosimicrobium cellulans
Pathway
cceu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cceu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CBR64_01990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cceu03021
]
CBR64_01990
03019 Messenger RNA biogenesis [BR:
cceu03019
]
CBR64_01990
Transcription machinery [BR:
cceu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CBR64_01990
Messenger RNA biogenesis [BR:
cceu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CBR64_01990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
ResIII
Motif
Other DBs
NCBI-ProteinID:
ARU50455
UniProt:
A0A1Y0HT16
LinkDB
All DBs
Position
complement(457612..459774)
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AA seq
720 aa
AA seq
DB search
MTDTIDTATSSATGSAAAGGNARTGALSTLRLPELQALASQLGVKGTSKMRKGDLVDVIR
ARTGEQGASERPAAPRRDTDGASAAGRETSEAPAASGRGRSRRAERPAASPTGTTDSAAP
ARQDAPSAASREERTAAPVLDLPVRSDEQRTEQRGEPRAERRDGRRDSRSEAAAAVAEAL
GEQGVRTRDASNESADERAARAAAAVGLVTGERGSRRAGRGAGAPRTGEGDGDASRADRQ
RDQQGGERQRDQQGGERQRDQQGGQQANQQVRGERQSDRRDDRQLLDDERGGRRRRGRDR
GRERDRKRGRNRQGPDVAGLDDIEVSEDDVLLPVAGILDILDNYAFVRTSGYLPGQNDVY
VSLGQVKKAGLRRGDAVTGAVRQPREGENQGNTARQKFNALVRLDTVNGMSPDEARQRPE
FTKLTPLYPQDRLRLENTEATRLTPRVIDIVAPIGKGQRGLIVAPPKAGKTIIMQQIANA
ITANNPEVHLMVVLVDERPEEVTDMERTVKGEVIASTFDRPASDHTIVAELAIERAKRLV
ELGQDVVVLLDSLTRLSRAYNLAAPASGRILSGGVDASALYPPKRFFGAARNIENGGSLT
ILASALVETGSKMDEVIFEEFKGTGNMELRLSRNLADKRIFPAVDVNASGTRREEILLSQ
DELKIVYKLRRVMGALDQQQAIELLLGQLKKTQTNVEFLLHVQKTTPGGLADDDNVGRTI
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
gtgacagacaccatcgacaccgccacgagcagcgcgaccggttcggccgctgccggcggg
aacgcccggaccggcgcgctctccacgctgcgcctcccggagctgcaggctctcgcctcg
cagctcggggtcaagggcacgtccaagatgcgcaagggcgatcttgtggacgtcatccgc
gcccgcaccggcgagcagggcgcctccgagcgccccgccgcgccgcggcgcgacacggac
ggggcgagcgccgcgggccgtgagacgagcgaggcgcctgccgcctccgggcgcggccgc
agccgccgcgccgagcggcccgccgcgagcccgacgggcaccaccgactcggcggcgccg
gcgcgccaggacgcgccgtcggccgcgagccgcgaggagcgcaccgccgctccggtgctc
gacctgccggtgcgctccgacgagcagcggacggaacagcgcggggagccgcgtgccgag
cggcgtgacggtcgtcgcgactcccgctcggaggccgctgccgcggtcgccgaggcgctc
ggcgagcagggcgtgcgcacgcgcgacgcctcgaacgagtccgccgacgagcgcgccgcg
cgcgccgccgcggcggtcggcctcgtcacgggcgagcggggctcgcgtcgcgcgggccgc
ggcgccggcgccccccggaccggcgagggcgacggtgacgcgtcgcgcgccgaccgtcag
cgcgaccagcagggcggcgagcgtcagcgtgaccagcagggcggcgagcgtcagcgtgac
cagcagggtggccagcaggccaaccagcaggtccgcggcgagcgccagtccgaccgccgc
gacgaccgccagctgctggacgacgagcgcggcggccgccgtcgccggggtcgtgaccgt
ggccgtgagcgcgaccgcaagcgtggccgcaaccgccagggaccggacgtcgcgggcctc
gacgacatcgaggtcagcgaggacgacgtcctgctccccgtcgcgggcatcctcgacatc
ctggacaactacgcgttcgtgcgcacgagcgggtacctgccgggccagaacgacgtctac
gtctcgctcggccaggtgaagaaggccggtctgcgccgcggcgacgcggtcacgggcgcc
gtgcgccagccgcgcgagggcgagaaccagggcaacacggcgcgccagaagttcaacgcg
ctcgtgcgcctggacaccgtcaacggcatgtcgcccgacgaggcgcgccagcgccccgag
ttcaccaagctcacgcccctgtacccgcaggaccgcctgcgcctggagaacaccgaggcg
acgcgtctgacgccgcgcgtgatcgacatcgtcgcgccgatcggcaagggccagcgcggc
ctcatcgtcgcgccgcccaaggccggcaagacgatcatcatgcagcagatcgccaacgcg
atcacggccaacaaccccgaggtccacctcatggtggtgctcgtggacgagcggcccgaa
gaggtcacggacatggagcggacggtgaagggcgaggtcatcgcctcgacgttcgaccgc
cccgcgtccgaccacacgatcgtcgcagagctcgcgatcgagcgcgcgaagcgcctggtc
gagctcggccaggacgtcgtcgtgctcctcgactcgctcacccgcctgtcgcgcgcgtac
aacctcgcggccccggcctcgggccgcatcctgtccggtggtgtggacgcgtccgcgctc
tacccgcccaagcgcttcttcggcgcggcccgcaacatcgagaacggcggctcgctgacg
atcctcgcctcggcgctcgtcgagacgggctcgaagatggacgaggtcatcttcgaggag
ttcaagggcacggggaacatggagctgcggctctcccggaacctcgccgacaagcgcatc
ttcccggccgtggacgtcaacgcgtccggcacgcgccgcgaggagatcctcctgtcgcag
gacgagctgaagatcgtctacaagctccgtcgcgtcatgggcgcgctcgaccagcagcag
gcgatcgagctgctgctcggccagctcaagaagacgcagacgaacgtcgagttcctgctc
cacgtccagaagacgacgcccggtggtctcgcggacgacgacaacgtcggccgcacgatc
tga
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