Campylobacter coli RM1875: YSQ_08165
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Entry
YSQ_08165 CDS
T03164
Name
(GenBank) UvrABC system subunit A
KO
K03701
excinuclease ABC subunit A
Organism
ccf
Campylobacter coli RM1875
Pathway
ccf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
YSQ_08165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccf03400
]
YSQ_08165
DNA repair and recombination proteins [BR:
ccf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
YSQ_08165
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
YSQ_08165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_29
nSTAND1
RsgA_GTPase
nSTAND3
AAA_16
AAA_15
AAA_21
AAA_33
APS_kinase
DnaJ_CXXCXGXG
Viral_helicase1
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AHK73898
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All DBs
Position
1529570..1532392
Genome browser
AA seq
940 aa
AA seq
DB search
MNDTIKIIGAKENNLKNIHLEIPKNKLIVFTGLSGSGKSTLAFGTLYAEGQRRYIESLSA
YARQFLDKVGKPDVDKIEGLTPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLYARVGIQH
CHQCGQKISSMSASDIVGEILKFPKGAKIIIYAPLVREKKGTYADLLENLRNKGYVRAQI
DGVLVRLDEDIELSKTKKHTIKLVIDRLEIQEDLLSRLASDIEKGLEESFGEIEIEVLNP
DEVGLNKHYHFSEHSACFACKISFVPLEPLSFSFNSPKGACEACDGLGIRYTLDMKKIID
ESLSLENGAVKIMYGFNKSYYYKFLIAFCEQNEIPIKLPFAELSEEQKRLVLYGNAKTID
FFWKRNRLKRTFEGVVKMAYEMLKDEKDLAEYMSEKICKDCAGHRLKPESLAVKVASKGL
GEILDMSIEDSTSFFANKKNFSYLSEQERLISEPILKEINERLFFLYDVGLGYLSLGRDA
RTISGGEAQRIRIASQIGSGLSGVMYVLDEPSIGLHERDTAKLIKTLRNLQQKGNTLIVV
EHDKMTIEEADFIVDIGPKAGKFGGEVVFAGTYKELLKSKSETALYMNGKKQISQLQNRE
QKEWLELKNVNINNIKDLSVSFPLQNLVAITGVSGSGKSSLILQTLLPFAQEELNRAKKV
KKLGGVQIEGLEKLDKVIYLDQSPIGRTPRSNPATYTGAMDEIRNLFAATKEAKMRGYKA
GRFSFNVKGGRCEKCSGDGEIKIEMHFLPDVMVVCDTCHGKRYNDATLEIKYKGKNISEI
LNMSVLEASEFFAAVPKIKQKLDTLVKVGLDYLTLGQNATTLSGGEAQRIKLAKELSRSD
TGKTLYILDEPTTGLHFEDVNKLILVLQHLVDLKNSVFVIEHNLDVIKNADYIIDMGPEG
GVKGGKIISTGSVEKVAKDHKKTKSYTGYYLDLELKNAKS
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatacgataaaaatcattggcgcaaaggaaaataatcttaaaaatattcatctt
gaaattccaaaaaataaactcattgtttttacaggattaagcggtagcggaaaatcaacc
cttgcttttggcacactctatgccgaaggtcaacgccgttatatagaaagtttgagtgct
tatgcaagacaatttttagacaaggtaggcaaacccgatgtggataaaatcgaaggttta
acccctgctattgcgattgatcaaaaaaccacttctaaaaatccgcgttctacagtcgga
accatcactgaaatttatgattatttaagacttttatatgcaagagtgggcattcagcat
tgccatcaatgcggacaaaaaatctcatctatgagtgcaagtgatatagtaggagaaatt
ttaaaatttccaaaaggagctaaaatcatcatctacgctcctttggtgcgtgaaaaaaaa
ggaacttatgcggatttacttgaaaatttgcgcaataaaggctatgtaagagcgcaaatt
gatggggttttagtaagacttgatgaagatatagaactttcaaaaactaaaaaacatacg
ataaaactcgtcattgatagactcgaaatacaagaagatctactttctcgccttgcaagc
gatatagaaaaaggtttggaagaaagctttggagaaatcgagatagaagtcttaaatccc
gatgaagtaggacttaataagcactatcactttagcgaacactccgcttgctttgcttgt
aaaatttcctttgttcctcttgagcctttaagtttttcttttaactctccaaaaggggct
tgtgaagcctgtgatggacttggaattcgctataccctagatatgaaaaaaatcatcgat
gaaagcctaagtcttgaaaatggcgcggtaaaaataatgtatggatttaacaaaagctat
tattataaatttttaattgctttttgcgagcaaaatgaaattcctattaaactccctttt
gctgaacttagcgaagaacaaaaacgccttgtgctatacggaaatgcaaaaaccattgac
tttttttggaaaagaaatcgcctcaaacgcacctttgaaggtgtggtaaaaatggcttat
gaaatgctaaaagatgaaaaagacttagcagaatacatgagtgaaaaaatttgcaaagat
tgtgcaggtcatcgtttaaaacctgaaagtttagccgtaaaagtagcctctaaaggacta
ggcgaaattttagatatgagtatagaagatagcactagcttttttgcaaataagaaaaat
ttctcttatttaagcgagcaagaaagacttatctctgaacccatattaaaagaaatcaac
gaaagacttttctttttatatgatgtaggactaggctatttatctttaggacgcgatgca
aggacgattagcggaggtgaggcacaaagaattcgcatcgcttcacaaattggcagtggt
ttaagtggggtgatgtatgttttagatgaacctagtatcggacttcatgaaagagataca
gcaaaactcattaaaaccttaagaaatttacaacaaaaaggcaatactctaattgtcgta
gagcacgataaaatgactatagaagaagctgattttatcgtagatattggcccaaaagca
ggaaaatttggaggcgaagtggtatttgctggaacttataaagaacttttaaaaagcaaa
agtgaaaccgcactttatatgaacggcaagaagcaaatttcacagcttcaaaacagagaa
caaaaagaatggctagaacttaaaaatgtaaatatcaataatatcaaagatctaagcgtt
tcttttcctttgcaaaatttagtcgcgatcacaggtgtttcaggatctggaaaaagctct
ctcatacttcaaaccttactgccttttgcacaagaagaattaaaccgcgccaaaaaagta
aagaaattaggtggggtgcagattgaagggcttgaaaaactagataaggtgatttatctt
gatcaaagtcctataggacgaaccccgcgatcaaatcctgctacttatacaggtgccatg
gatgaaattcgcaatctttttgctgctaccaaagaagctaaaatgcgaggctataaagcg
gggcgtttttcttttaatgttaagggtggaagatgtgagaaatgcagtggcgatggagag
attaaaatagaaatgcacttcttgcccgatgtaatggtggtttgcgatacttgccatggc
aaacgctataatgatgccacactagagattaaatacaaaggtaaaaatatcagtgaaatt
ttaaatatgagcgttttagaagcaagtgaattttttgcagctgtgccaaaaatcaaacaa
aaacttgataccttagtaaaagtcggacttgattatcttaccctaggacaaaatgcaacg
actttaagtgggggtgaagcgcaaaggataaaacttgcaaaagaattaagccgcagtgac
acaggaaaaacgctttacatacttgatgagccgaccacagggctacattttgaagatgtc
aataaactcattttagttttacaacacttagtcgatcttaaaaattctgtttttgtgata
gagcataatttagatgtgattaaaaatgctgattatatcatcgatatgggtccagaaggc
ggagtaaagggtggaaaaatcattagtacaggaagcgtggaaaaagttgcaaaagatcat
aagaaaacaaaatcttatacaggatattatttggatttagagcttaaaaacgcaaagagt
taa
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