KEGG   Coprinopsis cinerea: CC1G_14831Help
Entry
CC1G_14831        CDS       T01275                                 

Definition
(RefSeq) DNA ligase IV
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
cci  Coprinopsis cinerea
Pathway
cci03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cci00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    CC1G_14831
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cci03400]
    CC1G_14831
Enzymes [BR:cci01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     CC1G_14831
DNA repair and recombination proteins [BR:cci03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     CC1G_14831
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C BRCT_2 RNA_ligase BRCT DUF4073
Motif
Other DBs
NCBI-GeneID: 9379321
NCBI-ProteinID: XP_002910852
UniProt: A8N936
LinkDB All DBs
Position
7
AA seq 970 aa AA seqDB search
MQPTPAPSSAPGSPQRTQAEPEMETPSYPQPPQNVGTAPFSVLVKLFEKLATERKQERRR
KLLDAWFRHWRREKGFDLYPVLRLLLPQKDRDRAVYGLKEKNLAKTYIKLIPLGMRDPDA
IRLLNWKKPTERDVLCEVVSKRSSVIEGTLTIDELNEILDDIAKNMGKSDVQSKILRRIY
NNSTADEQRWIIRIILKDMNISVKETTVFAVFHPDAQDLYNTCSDLKKVAWELWDPSRRL
NAKDKEIQIFHAFAPMLCKRPTRKIEETVKAMGGSKFIIEEKLDGERMQLHKRGNEYFYC
SRKGKDYTYLYGKHIGAGSLTPFIDSAFDSRIDDIILDGEMLVWDPVSERNLPFGTLKTA
ALGRSKKENNPRPCFKVFDLLYLNGMSLLDKTVKFRKNNLRHCIKPIPGRIEFVEEYQGE
TANDIRKRMEQVMENRGEGLVIKHPKAKYILNGRNTDWIKVKPEYMDNMGETVDVLVVAG
NYGSGKRGGGVSTLICAVMDDRRPDSDDEPNSFVRIGTGLSFADYVWVRSKPWKVWDPKN
PPEFLQTAKKGQEDKGDVYLEPEESVGLIYRIHSDANGGSLYCVRSSFILKVKAAEITPS
DQYHMGFTMRFPRALAIRDDLSIADCMTATGKYPVLAGIRITTKKRKTTVKKVALLPEYS
GPNLKKVAVKTDIFNGMKFVVFSDPKSRTGEADKKELMKTIHANGGTCSQIVNKNSEAIV
IYGGSITPYDLKLVIDKGIHDVIKPSWITDSVTLGEPAPFKKKYFFHATEERKYADEYNE
DDGEEEGAVPSADEQERDVKSGTVEPGSETEDEDEEQAPEIKEEQDGELHEWLKVDDRKS
PALPAHDEEDSVTEDDSDNADVADEEEPDLDDWFQVKGETEDEGAGALATASRHRETTPD
VDGDVKMGESEEAMDYDPDVIFKHFFEEVEKLIKDNGGKIVDLDEPKLTHVVLDKRDDSR
RVELMKRTSK
NT seq 2913 nt NT seq  +upstreamnt  +downstreamnt
atgcagccaacgccagcaccgtcgtcagcacctggttcccctcaacgaacccaagctgaa
ccggaaatggaaacaccctcatatccacaacctccacagaacgtagggactgcaccattt
agcgtcctggtcaaactctttgagaaacttgccacggaacggaaacaagaaagacgaaga
aaacttctggatgcatggtttagacactggcgaagggagaagggctttgacctttaccca
gttcttcggctgttactaccacaaaaagacagagaccgcgctgtgtatgggttgaaggag
aagaacttggcgaagacctacatcaaactcatccctcttggaatgcgcgacccagatgcg
atccgcctcctgaactggaaaaagccaactgaacgcgacgtactgtgcgaggtcgtctcc
aagcggtcgtctgtgatcgaagggactttgactatcgacgaacttaatgagatcttggac
gatatagctaagaacatgggcaaatcggatgtgcagtcgaagattctgaggaggatatac
aacaattcgacggcggatgagcaacggtggatcatccgtattattctgaaggatatgaac
atctccgtcaaggagaccacagtgtttgcagtcttccatcccgatgcacaagatctttac
aacacctgctcggacctgaagaaagtcgcatgggaactttgggatccttcgcgccggctt
aatgcgaaggacaaagaaatccaaatctttcatgcattcgctcctatgttgtgcaaacgg
ccgactagaaagatagaagagacagtcaaagcgatgggtggatccaaatttatcattgag
gagaagctcgatggtgaacgaatgcagctccataagcgaggcaatgaatacttctactgc
tcacggaaaggcaaagactatacttatctttatggaaagcacatcggtgctggaagttta
acaccttttatcgactctgctttcgactcaagaattgatgatatcatccttgatggagag
atgcttgtctgggaccccgtctctgaaagaaaccttccattcggaacattgaagaccgcc
gcacttggtaggtccaagaaagagaacaacccccgaccctgcttcaaagtattcgacttg
ctatatctgaacggaatgtcccttctcgacaagacggtgaaatttcgtaagaacaacctg
cgacactgcatcaaaccaatccctggccggattgaatttgttgaggagtaccaaggcgaa
accgcaaatgacatccggaagcgaatggagcaagtcatggagaatagaggagaaggcctc
gtcatcaagcatcccaaggcaaaatatatcttgaatgggagaaacaccgattggatcaag
gtcaagccggagtatatggataatatgggtgaaacggtagatgtactcgtcgttgccgga
aactacggcagtgggaagaggggtggtggcgtgtcaactttgatttgtgccgtcatggac
gaccgtcgtccagactcggacgatgagcccaacagttttgtacgtatcggcacgggactg
tcgtttgccgactacgtctgggtgaggagcaaaccgtggaaggtctgggaccctaagaat
cctcccgagtttttgcagactgcgaagaaaggtcaggaggacaagggtgacgtttatctg
gaaccagaagagtccgtaggcttaatttatcggatacactctgatgctaatggtggttct
ctttactgtgtacgcagttccttcattctgaaagtcaaggcagcggaaattaccccttca
gaccaataccacatgggatttactatgaggttcccccgtgcattggctatccgggatgat
ttatctatcgcggattgcatgacagcgaccggcaagtatcccgtattggcagggatcagg
ataactacaaagaaacggaagacaacagtaaagaaggtcgcactgttgcccgaatactct
gggcccaacctgaagaaagtcgctgtcaaaactgatatattcaacggcatgaagtttgtc
gtcttctcagatcccaagtcacgaacaggagaagcagacaagaaggagctcatgaaaacg
attcatgcaaatggtggaacctgctctcagatagtcaataagaattccgaggcgattgtc
atttatggaggctcaataactccatatgacctgaagttggtgattgataaagggatccac
gatgttatcaagccatcgtggatcacagattctgtgaccctaggagagccagcacccttc
aaaaagaagtacttcttccacgccaccgaagaacggaaatatgcagatgaatataatgaa
gatgacggcgaggaagagggggcggtacccagtgcagacgagcaagaaagggacgttaaa
tctgggactgtcgagcccgggtctgagacggaagacgaagacgaagagcaggctccggaa
atcaaggaggaacaggatggggaactgcacgaatggttaaaggttgatgaccggaaatca
ccagcgttgcccgctcatgacgaagaagattctgtaacggaggacgattccgacaatgct
gacgtcgctgacgaggaagaacctgacttggacgattggttccaagtgaagggggaaaca
gaagatgagggagctggagctctagcaacagcatcaaggcacagagagacaacgcctgac
gtcgacggagatgttaagatgggggagagtgaagaggctatggattacgatccggatgtc
atcttcaaacacttctttgaagaagtcgaaaaactcattaaagataacgggggcaagatt
gttgatttggacgagccaaagctaacacacgttgtgcttgataaacgagatgatagtcgc
cgggttgagctcatgaaacgcacatcaaagtga

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