Clostridium carboxidivorans: Ccar_03005
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Entry
Ccar_03005 CDS
T03979
Definition
(GenBank) LacI family transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
cck
Clostridium carboxidivorans
Pathway
cck02010
ABC transporters
cck02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
cck00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Ccar_03005
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Ccar_03005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cck02000
]
Ccar_03005
Transporters [BR:
cck02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Ccar_03005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
ACP_syn_III
Motif
Other DBs
NCBI-ProteinID:
AKN29863
UniProt:
C6PMK8
LinkDB
All DBs
Position
697827..698816
Genome map
AA seq
329 aa
AA seq
DB search
MKKFPIFIKYTLFILYFIIMNGILLTALREPTIIDEKIKPKITLISHVYSNPYWKYIKLG
AEKAAKQRNAVIDFQGPDTASAGEGIKFINMAYAAKVSGIITYVQDEAMYKPVIDKVLAG
GIPIVTVDSDAENSKRLAYVGTDNVTAGRVGAKEMIHHVGIYGNVGIIMGGKNVKNQIER
VNGFTEYIKSNSKLNISEIESSDSYLLEAELATKKILINNKDIKAVFCTSALDGQGAAKA
LISMGAAEKVKIICFDDLPETLDYIKNGTITSTIVQDPYGMGYKAVNIIMDIMEGKDTKG
VFLTDVIVVSKDNIDEFKKTRGEYDSEKQ
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattcccaatatttataaaatacacattatttattttatactttataataatg
aacgggatacttctaaccgctctcagagagccaactattattgatgagaaaatcaaacct
aaaataacactaattagccatgtgtactcgaatccttattggaaatatataaaattaggt
gcagaaaaggcagccaaacagagaaatgctgttattgattttcaaggaccagatactgca
agcgcaggggaaggtataaaatttataaatatggcttatgctgctaaagtcagcgggatt
attacatatgttcaggatgaagctatgtataaacctgttatcgacaaagtattagcaggt
ggaattcccattgtaacagtggattccgatgcagaaaatagtaaacgtttagcttatgta
ggtactgataatgttactgcaggcagagttggcgctaaggaaatgattcatcatgttggc
atctatggcaatgtaggaattattatgggtggaaaaaatgttaagaatcaaattgaaaga
gtaaatggtttcactgagtatataaagagtaattcaaaacttaatatatcagagattgag
tcctcagattcatatcttttggaagcagagcttgcaactaaaaaaatattgataaataac
aaggatattaaggctgtattttgtacttcagcactagatggacaaggtgcagctaaagca
ttaatcagtatgggagctgcagaaaaagtcaagattatttgttttgatgatttgcctgaa
acccttgattatataaaaaatggaaccattacttctacaattgtacaagacccctatggt
atgggatataaagcagtaaatataataatggatattatggaaggtaaagatactaaaggt
gtatttcttacagatgttattgtagttagtaaagataacattgatgaatttaaaaaaaca
cgaggagagtatgatagtgaaaagcagtag
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