Clostridium carboxidivorans: Ccar_23670
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Entry
Ccar_23670 CDS
T03979
Name
(GenBank) DNA recombination protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
cck
Clostridium carboxidivorans
Pathway
cck03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cck00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Ccar_23670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cck03400
]
Ccar_23670
DNA repair and recombination proteins [BR:
cck03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Ccar_23670
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Ccar_23670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
RecO_N_2
KCTD11_21_C
C6_DPF
Motif
Other DBs
NCBI-ProteinID:
AKN34242
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Position
5266541..5267314
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AA seq
257 aa
AA seq
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MVECGGGGFLSIFKTRAVVIKTQDIKESDKLVWLFSEKLGKISTIAKGSKKSSNKLFTST
LQFSYGDYVVYKGKSLYVINESTAIDSFQELLNDLDKLTYASYFCEIIDISMQDEESNRE
LFKLLITAFYFLKNKVVDIEILARAFEIKALQATGYGFNLEHCCMCRKKINTSNYISFQY
SGGVCQECAKVNGINVSYPAYNALKYISKIPLENVYRVNLSKEIKDELYKVLSQFIDQSY
FRRPKSLDILNCLTKFE
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
ttggtagagtgtggagggggtggttttctgtccatatttaagaccagggctgtagttata
aaaactcaagatataaaagaatcagacaaacttgtttggctatttagtgaaaagttggga
aagatatcgactattgcgaaaggttcgaaaaaaagtagtaataaattatttactagtact
ttgcaattttcctatggagactatgtagtttacaaagggaaaagtctttatgtaattaat
gaaagcacagctatagattcattccaagaactacttaatgatttagataaattaacttat
gcatcttatttttgtgaaattatagacatatccatgcaggatgaagaaagtaacagggaa
cttttcaaattactaattacagctttttattttttaaagaataaggttgttgatatagaa
attttagcaagagcttttgaaataaaagctttacaagctacaggatatggttttaattta
gaacattgctgtatgtgtagaaaaaaaataaatacttctaactatataagtttccagtat
tctggaggggtttgccaagaatgtgcaaaagtcaatggtattaatgtaagttatccagca
tataacgctcttaaatatatatctaaaattcctctagaaaatgtatatagagttaattta
tcaaaagaaataaaagatgagctttacaaagtattatctcaatttattgatcaaagttat
tttagaagacctaaaagtttggatatacttaattgtttaacaaaatttgaatga
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