Capnocytophaga canimorsus: Ccan_10400
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Entry
Ccan_10400 CDS
T01582
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ccm
Capnocytophaga canimorsus
Pathway
ccm03030
DNA replication
ccm03430
Mismatch repair
ccm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ccan_10400
03430 Mismatch repair
Ccan_10400
03440 Homologous recombination
Ccan_10400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccm03032
]
Ccan_10400
03400 DNA repair and recombination proteins [BR:
ccm03400
]
Ccan_10400
Enzymes [BR:
ccm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ccan_10400
DNA replication proteins [BR:
ccm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ccan_10400
DNA repair and recombination proteins [BR:
ccm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ccan_10400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Alkyl_sulf_C
FapA_N
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
AEK23156
UniProt:
F9YVB1
LinkDB
All DBs
Position
complement(1110308..1114765)
Genome browser
AA seq
1485 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPITDSDNWPRAVQIAWQLHDRHGELIEHKDFLITPDDFNIPY
DAEKVHGISTELAQQQGVSIQKVFEEFNEALQKSTYVVGQNIGFDINIMGAEFHRYGVDS
PLVNMPVLDTCTEITAELCKISGGRGGRYKLPTLTELHEFLFNVPFAEAHNATADVEATT
RCFFELIRIGQGFETKDISAEYITEFQQYNPAEIQPIGLKHINLKKASEEIRKEIQKQSG
SGLSEQEINANIALLEKAPFAHLHNHTQFSVLQATTSIQSLVKKTIQEKMPAVAMTDSGN
MMGAFHFIKEVLGHNKSAKAKNDEAIEKGETPSEIEIKPIVGCEFNVCENHLDKSHQDNG
YQVVMLAKNKNGYHNLAKMASIAYTDGYYYVPRIDRNIVEKYKENLIVLTGGMNGEVPSK
VLNIGEKQAETALLWWKNLFGEDLYIELMRHNQEDENRVNQVLIELSKKHQVKLVATNNT
FYINQKDANAHDILLCVKDGEKQATPIGRGRGYRFGMPNQEYYYKSAEQMKTLFKDVPEA
ILNIQEIIDKIEIYNLAREVLLPKFQIPDEFLVEDDPDGKKGENKYLRHLTYLGAEKRYE
LPLSEEVIERLDFELMIIEKTGYPGYFLIVQDFIAAAREMGVSVGPGRGSAAGSAVAYCL
GITNIDPIKYDLLFERFLNPDRVSMPDIDIDFDDEGRSLVMDYVINKYGKNQVAQIITYG
TMAAKSSIRDTARVLDLPLHESDRIAKLVPNMKLAKIFSMDDKQLKEKLRSDELPKVNEL
KQIAEGTDLAAETLQQAQVLEGSVRNTGIHACGVIITPDDITNFVPVSVAKDSDLFVTQF
DNSVVESAGLLKMDFLGLKTLTLIKDSVELIKRRNGIEINPDEIPIDDKKTYELFQRGET
VGIFQYESPGMQKYMRELKPTVFADLIAMNALYRPGPLEYIPSFIKRKHGTEPIVYDLDA
MEEYLKETYGITVYQEQVMLLSQKLAGFSKGDADMLRKAMGKKIFALLEKLKPKFVEGGI
KNGHPADILEKIWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKANYPAEFMAAVLSNNMN
DIKQVSFFLEECQRMGIKVLSPDVNESFYKFTVNKDGNIRFGMGAIKGVGKNAVETIVDS
RKDGNYTSIFDVTRRVDFRNINKKAFENIALAGGFDSFTKVHRAQYFHDEGDGIVFLEKA
IRYGNKYQENKNSPQMSLFGESSGVEIPEPTIPNCESWGNLEQLRREKEVVGIYISGHPL
DDFKHSLDNFCNLSLTQLQDLSPLINREISIAGMITDVQHRTSKNGKGWASFILEDYEGS
HEFRLFNDDYLKFRNYLILGTFLYCKFVVKEGWQKKDNNEKAEPRIQFTMMMQLQDVLTN
LAKKIALHLNIKDISTDLIKNYKNIIEKHRGNYPITFIVHNMEENIHLNMDNGQLKVDIS
KEFLEELDQKSVSYVLNDRKMEKLITKKKEEVEEEQLEVELIEEN
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaattttcgataccgaaaccacaggtttaccaaaacgttgggacgcacctatc
acagattcagataattggcctcgtgccgtacagattgcttggcagttgcacgaccgacac
ggagaactcatcgaacataaagattttctcatcactcctgatgattttaacattccgtat
gatgctgaaaaagtacacggaatatccaccgaattagctcaacaacaaggagtttcaatt
caaaaagtattcgaagagtttaatgaagctttacaaaaatcaacttacgttgtggggcaa
aatattgggtttgatatcaatattatgggtgccgaatttcatcgctatggcgttgatagt
ccgcttgttaatatgcctgttttggatacttgtaccgaaatcacagcagaactctgcaag
atatctggtggacgtggtggtcgttataaattacctacactcaccgagttacacgaattt
ctgttcaatgttccttttgcagaagcacataatgccactgccgacgtggaagcaactacc
cgttgtttctttgaactgatacgtatcggacaaggatttgaaacaaaagatatttcagct
gaatacattactgaatttcaacaatataacccagcagaaattcaacccattgggctaaaa
cacatcaacctgaaaaaggcttcggaagaaattcgtaaagaaattcaaaagcaatcggga
agcggattaagtgagcaggaaattaatgcaaatattgccttgttggaaaaagctccgttt
gctcatttgcacaatcacacacaattctctgtattacaagccactacatctatccaaagt
ttggtaaagaaaaccattcaggagaaaatgcctgccgtggcaatgaccgacagcggaaat
atgatgggggcttttcatttcatcaaggaagttttgggacacaacaaatccgccaaagcc
aaaaatgatgaagctatagaaaagggcgaaactccttccgaaatcgaaattaaacccatt
gtcgggtgcgaatttaatgtctgtgaaaatcatttagacaaaagccatcaagacaatggt
taccaagttgttatgttagctaaaaataaaaatggctatcacaatttggcaaaaatggct
tccattgcttatactgatggttattattacgtaccgagaattgacagaaatatcgttgaa
aaatacaaagaaaacctcatcgtattaactggtggaatgaatggcgaagttccgtccaaa
gtgctgaatatcggagagaaacaagccgaaacagcattactttggtggaaaaatcttttc
ggtgaagacctttacattgaactgatgcgacacaatcaagaagatgaaaatcgtgtcaat
caagtacttatagaactatcgaaaaagcatcaagtaaagctcgtagccaccaataacaca
ttctatatcaaccagaaagatgccaacgcacacgatattttactgtgtgtaaaggacgga
gaaaaacaggcaactcccatcggaagaggtcgcggatatcgcttcggaatgcccaatcag
gaatattattacaagtctgccgagcaaatgaaaactttgtttaaggacgttccagaagcc
attttaaatattcaagaaatcattgataaaattgaaatttataacttagctcgagaggtt
ttattgccaaaatttcaaattcctgacgaatttctggtagaagatgaccctgatggaaaa
aaaggagaaaacaaatatctccgacatctgacttatctcggagcagaaaaacgctatgaa
cttcctctttctgaagaagttattgagcgattggattttgaattgatgattattgaaaaa
acaggatatcctgggtatttccttatcgttcaggactttatcgcagcagctcgtgaaatg
ggcgtttccgtaggtccaggaagggggtcagcggcaggttcggcagtagcttattgcctc
ggaattacgaacatagacccaatcaaatacgacttactttttgagcgtttcctcaaccct
gaccgcgtaagtatgcccgatatcgatattgactttgatgacgaaggacgctcattagta
atggattacgttatcaacaagtacggaaaaaatcaggtggctcaaatcatcacttacgga
acgatggcggcgaaatcttccattcgggataccgctcgtgtactggatttacctttgcac
gagtccgacagaattgccaagctcgtgccaaatatgaaattggcaaagattttcagtatg
gacgacaaacagctgaaagaaaaactacgttccgatgaacttccaaaagtaaacgaactc
aaacaaatagccgaaggtacggatttggctgccgaaacgctgcaacaagctcaagttctg
gaaggttctgttcgcaatacgggaattcacgcctgtggcgttattatcactcctgatgat
attaccaattttgtgcctgtttcagtcgctaaagattcggatttatttgttactcagttt
gataactccgttgtggaaagtgctggactgctaaaaatggactttttagggcttaagaca
ctcaccttgattaaagattctgtcgaacttataaaaaggcggaatggcatagaaatcaat
cctgatgaaattccgattgatgacaaaaaaacgtacgagcttttccaacgtggtgaaact
gtggggattttccaatacgagtcgcctggaatgcaaaaatatatgcgagagctgaaacct
accgtttttgctgatttaattgcgatgaacgccctataccgaccaggacccttggagtac
attccgagttttatcaaacgcaaacacggcacggaacccattgtgtatgaccttgatgca
atggaagaatatctcaaagaaacttacggaattacggtatatcaggagcaagtaatgtta
ctttctcagaaattggctggtttttccaaaggtgatgctgatatgcttcgtaaagcaatg
gggaaaaagattttcgccttgcttgaaaaactaaaacctaaatttgtggaaggaggcatc
aaaaacggacatcctgcggatattttagaaaaaatttggaaggactgggaagcctttgcg
agttacgcttttaacaaatcgcattccacttgttatgcttggattgcctaccaaactgca
tatttgaaagccaactatcctgctgaatttatggcggcggtactttccaataatatgaac
gatattaagcaagtttcgttctttttggaagaatgccaacgtatgggaatcaaagtgtta
agccctgatgtaaatgaatcgttttacaaatttaccgtaaataaagacggaaacattcgc
tttggaatgggagccatcaaaggggttggaaaaaatgcagtagaaaccattgttgatagc
cgaaaagatggaaattatacttccatttttgatgtaaccagacgcgtagatttcagaaat
attaacaaaaaagcctttgaaaacatagctttggcaggtggatttgattctttcaccaaa
gtgcatcgggctcaatattttcacgatgaaggcgatgggattgtctttttagaaaaagct
atccgctatggcaataagtatcaggaaaataaaaactcccctcaaatgagtttatttgga
gaaagttcgggagttgaaattcctgaacctaccattccgaattgtgaaagttggggaaat
ttggaacaattacgtcgcgaaaaagaagttgtagggatttacatttcagggcatccgtta
gatgattttaaacattcgttggacaatttctgtaatttatcacttacacaattacaagac
ctttctcccttgattaacagagaaataagtattgccggaatgattaccgatgtccagcat
cgcacctctaaaaacggaaaaggttgggcgtcatttattttggaagattatgaagggtcg
cacgaattcagattatttaatgatgattatttaaaatttcgtaactacctcattttaggc
acttttctgtattgtaaatttgtagtcaaagaaggttggcagaagaaggataataacgaa
aaagcagaacctcgcattcagtttacaatgatgatgcaattacaagatgtactcactaat
ttggcaaaaaaaatcgctttacatctaaacattaaagatatttcaactgatttgattaaa
aattataaaaatattattgaaaaacatcgaggaaattatccaattacgttcattgtacac
aatatggaagaaaatatacatctaaatatggacaatggacaactgaaagtcgatatttca
aaagaatttcttgaagaattagaccaaaaatcagtttcatacgtgttgaatgaccgaaaa
atggagaaattgattaccaaaaagaaagaggaagtcgaagaagaacaattagaagttgaa
ttaatcgaagaaaattaa
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