Clostridium cochlearium: SAMEA4530647_0259
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Entry
SAMEA4530647_0259 CDS
T06756
Symbol
topB_1
Name
(GenBank) DNA topoisomerase III
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
ccoh
Clostridium cochlearium
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccoh03032
]
SAMEA4530647_0259 (topB_1)
Enzymes [BR:
ccoh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SAMEA4530647_0259 (topB_1)
DNA replication proteins [BR:
ccoh03032
]
Prokaryotic type
DNA Topoisomerases
SAMEA4530647_0259 (topB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
OrfB_Zn_ribbon
TF_Zn_Ribbon
zf-C4_Topoisom
Toprim_4
zf-TFIIB
LysW-like_globular
Prok-RING_1
RNA_POL_M_15KD
zinc-ribbons_6
DUF35_N
Motif
Other DBs
NCBI-ProteinID:
SNV65948
LinkDB
All DBs
Position
1:257302..259494
Genome browser
AA seq
730 aa
AA seq
DB search
MGKSLVLAEKPSVGREIARVLKCNKSSKSYIEGNKYVVTWALGHLVTLADPEVYDDKYKK
WAMETLPMIPKNMKLSVIGKTSKQFNEVKKLMNRKDIDEIIIATDAGREGELVARWIIEK
ARVNKPIKRLWISSQTDKAIRDGFNNLKPGKDYENLYKSAVSRSEADWLVGLNVTRALTC
KYNAQLSAGRVQTPTLALIVEREEEIKNFKPRDYYTIVAKAKGIQFNWQDKKGQMYTFNE
EFAKNTLSKVSGEVGSVVEITEKDKKQYAPCLYDLTELQRDANRIFGYSAKETLSIMQRL
YEYHKVLTYPRTDSRYISKDIVSTIPQRLKSISIGSYSKFAEEILRGKIIAHKGFVDDSK
VSDHHAIIPTEEKVKLSNLSSEERKIYDLVIKRFLSVMLPPFEYIQTTVKVEVNGETFTA
KGKNIKHNGWKAVYNKEDLNEDNDNGYELKEQILPKFIKGDTIKFNSVNINKGQTKPPAR
FNEGTLLSAMENPQKYIKLNKEYAKTLGETGGLGTVATRADIIEKLYNSFYIEKKGKEIM
PTSKGKQIIDLVPQDLKSPILTAQWEKELELISKGKISGKEFINNMRNYSTKLVQDVKNS
NEKYVHNNLTGTKCPNCGKYMLEVNGKRGKILVCQDRECGYRENISRYTNVRCPECHKKL
ELRGEGEGQIYVCPKCTFREKLSSFNNRFKEKGDNADKREVSKYMRKMKEQEKQPINSAL
ADALSKLNLK
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaatcattagttttggcagaaaagccaagtgtaggtagagaaatagctagagta
ttaaagtgtaataaaagttctaaaagctatatagaaggtaataaatatgtagttacgtgg
gcactagggcacttagttacccttgctgatccagaggtatatgatgataaatataaaaaa
tgggctatggaaactcttcctatgattccaaaaaatatgaagctttctgttataggtaaa
acttcgaaacaatttaatgaagtgaaaaaacttatgaatagaaaggatatagatgaaatt
attatagccacagatgcaggaagagagggggagttggtagctagatggataatagaaaag
gcaagagttaataagccaattaaaagactttggatatcttcacaaacagacaaagctata
agagatggttttaataatttaaagccaggaaaagattatgaaaatctatataaatcagct
gtatctagatccgaagcagattggttagtaggtcttaatgttacaagagcattaacctgt
aaatacaatgctcagctttcagcaggaagagttcaaacaccaactcttgcattaatagta
gaaagagaagaggaaattaaaaactttaaaccaagagattattatactatagttgctaaa
gctaagggaattcaatttaactggcaggataaaaaaggacaaatgtatacctttaatgaa
gaatttgcaaaaaatactttatctaaggttagtggagaagttggtagtgttgtagaaatt
acagaaaaggataaaaagcaatacgctccatgtctttatgatttaacagaacttcaaaga
gatgctaatagaatatttggatattctgcaaaggaaaccctttccataatgcagaggtta
tatgaatatcataaagtattaacttatccaagaacagattcaaggtatatttcaaaagat
atagtatcaactatacctcaaagactaaagagcatatctataggaagttatagtaaattt
gcagaagaaatattaaggggaaaaattatagcacataaagggtttgtagatgatagtaaa
gtttcagaccatcatgccataattccaacagaagaaaaagttaaattatcaaatttaagc
agtgaagaaagaaaaatatatgatttagttataaagagatttttaagtgtaatgcttcca
ccatttgaatatattcaaactactgttaaagtagaagttaatggagagacttttacggca
aaaggaaagaatataaaacataatggatggaaagctgtatataataaagaagatttaaat
gaagacaatgataatgggtatgagcttaaagaacagattcttcctaaatttatcaaagga
gatactataaaatttaactcagttaatataaataaagggcaaacaaagccaccagctaga
tttaacgaaggtacattattatctgcaatggaaaaccctcaaaaatatataaaattgaat
aaagaatatgcaaagactttaggggaaactggaggacttggaacagtagctacaagagca
gatataatagaaaaattatataattctttttatatagagaaaaaaggtaaagaaataatg
cctacatcaaagggaaaacaaattatagacttagtgccacaggatttaaaatctcctata
ttaacagcacagtgggagaaagaattagaattaataagtaaaggtaagatcagtggcaaa
gaatttataaataacatgagaaattattcaacaaaacttgtgcaggatgtaaaaaatagc
aatgaaaaatacgtacacaataatttaacaggaacaaaatgtcctaattgcggaaagtat
atgcttgaagttaacggtaaaagaggtaagatactagtatgccaggatagagaatgcgga
tacagagaaaatatcagtagatatactaatgtaagatgtcctgagtgtcataaaaagcta
gaactaagaggagaaggagaagggcaaatttatgtatgtccaaaatgtacatttagagaa
aagctttcatcctttaataatagatttaaagaaaaaggagataatgcagataaaagagaa
gtatcaaaatatatgagaaagatgaaagaacaagaaaaacaacctataaattcagcttta
gcagatgcgttatcaaaattaaatttaaagtaa
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