KEGG   Clostridium cochlearium: SAMEA4530647_0259
Entry
SAMEA4530647_0259 CDS       T06756                                 
Symbol
topB_1
Name
(GenBank) DNA topoisomerase III
  KO
K03169  DNA topoisomerase III [EC:5.6.2.1]
Organism
ccoh  Clostridium cochlearium
Brite
KEGG Orthology (KO) [BR:ccoh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccoh03032]
    SAMEA4530647_0259 (topB_1)
Enzymes [BR:ccoh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     SAMEA4530647_0259 (topB_1)
DNA replication proteins [BR:ccoh03032]
 Prokaryotic type
  DNA Topoisomerases
   SAMEA4530647_0259 (topB_1)
SSDB
Motif
Pfam: Topoisom_bac Toprim OrfB_Zn_ribbon TF_Zn_Ribbon zf-C4_Topoisom Toprim_4 zf-TFIIB LysW-like_globular Prok-RING_1 RNA_POL_M_15KD zinc-ribbons_6 DUF35_N
Other DBs
NCBI-ProteinID: SNV65948
LinkDB
Position
1:257302..259494
AA seq 730 aa
MGKSLVLAEKPSVGREIARVLKCNKSSKSYIEGNKYVVTWALGHLVTLADPEVYDDKYKK
WAMETLPMIPKNMKLSVIGKTSKQFNEVKKLMNRKDIDEIIIATDAGREGELVARWIIEK
ARVNKPIKRLWISSQTDKAIRDGFNNLKPGKDYENLYKSAVSRSEADWLVGLNVTRALTC
KYNAQLSAGRVQTPTLALIVEREEEIKNFKPRDYYTIVAKAKGIQFNWQDKKGQMYTFNE
EFAKNTLSKVSGEVGSVVEITEKDKKQYAPCLYDLTELQRDANRIFGYSAKETLSIMQRL
YEYHKVLTYPRTDSRYISKDIVSTIPQRLKSISIGSYSKFAEEILRGKIIAHKGFVDDSK
VSDHHAIIPTEEKVKLSNLSSEERKIYDLVIKRFLSVMLPPFEYIQTTVKVEVNGETFTA
KGKNIKHNGWKAVYNKEDLNEDNDNGYELKEQILPKFIKGDTIKFNSVNINKGQTKPPAR
FNEGTLLSAMENPQKYIKLNKEYAKTLGETGGLGTVATRADIIEKLYNSFYIEKKGKEIM
PTSKGKQIIDLVPQDLKSPILTAQWEKELELISKGKISGKEFINNMRNYSTKLVQDVKNS
NEKYVHNNLTGTKCPNCGKYMLEVNGKRGKILVCQDRECGYRENISRYTNVRCPECHKKL
ELRGEGEGQIYVCPKCTFREKLSSFNNRFKEKGDNADKREVSKYMRKMKEQEKQPINSAL
ADALSKLNLK
NT seq 2193 nt   +upstreamnt  +downstreamnt
atgggaaaatcattagttttggcagaaaagccaagtgtaggtagagaaatagctagagta
ttaaagtgtaataaaagttctaaaagctatatagaaggtaataaatatgtagttacgtgg
gcactagggcacttagttacccttgctgatccagaggtatatgatgataaatataaaaaa
tgggctatggaaactcttcctatgattccaaaaaatatgaagctttctgttataggtaaa
acttcgaaacaatttaatgaagtgaaaaaacttatgaatagaaaggatatagatgaaatt
attatagccacagatgcaggaagagagggggagttggtagctagatggataatagaaaag
gcaagagttaataagccaattaaaagactttggatatcttcacaaacagacaaagctata
agagatggttttaataatttaaagccaggaaaagattatgaaaatctatataaatcagct
gtatctagatccgaagcagattggttagtaggtcttaatgttacaagagcattaacctgt
aaatacaatgctcagctttcagcaggaagagttcaaacaccaactcttgcattaatagta
gaaagagaagaggaaattaaaaactttaaaccaagagattattatactatagttgctaaa
gctaagggaattcaatttaactggcaggataaaaaaggacaaatgtatacctttaatgaa
gaatttgcaaaaaatactttatctaaggttagtggagaagttggtagtgttgtagaaatt
acagaaaaggataaaaagcaatacgctccatgtctttatgatttaacagaacttcaaaga
gatgctaatagaatatttggatattctgcaaaggaaaccctttccataatgcagaggtta
tatgaatatcataaagtattaacttatccaagaacagattcaaggtatatttcaaaagat
atagtatcaactatacctcaaagactaaagagcatatctataggaagttatagtaaattt
gcagaagaaatattaaggggaaaaattatagcacataaagggtttgtagatgatagtaaa
gtttcagaccatcatgccataattccaacagaagaaaaagttaaattatcaaatttaagc
agtgaagaaagaaaaatatatgatttagttataaagagatttttaagtgtaatgcttcca
ccatttgaatatattcaaactactgttaaagtagaagttaatggagagacttttacggca
aaaggaaagaatataaaacataatggatggaaagctgtatataataaagaagatttaaat
gaagacaatgataatgggtatgagcttaaagaacagattcttcctaaatttatcaaagga
gatactataaaatttaactcagttaatataaataaagggcaaacaaagccaccagctaga
tttaacgaaggtacattattatctgcaatggaaaaccctcaaaaatatataaaattgaat
aaagaatatgcaaagactttaggggaaactggaggacttggaacagtagctacaagagca
gatataatagaaaaattatataattctttttatatagagaaaaaaggtaaagaaataatg
cctacatcaaagggaaaacaaattatagacttagtgccacaggatttaaaatctcctata
ttaacagcacagtgggagaaagaattagaattaataagtaaaggtaagatcagtggcaaa
gaatttataaataacatgagaaattattcaacaaaacttgtgcaggatgtaaaaaatagc
aatgaaaaatacgtacacaataatttaacaggaacaaaatgtcctaattgcggaaagtat
atgcttgaagttaacggtaaaagaggtaagatactagtatgccaggatagagaatgcgga
tacagagaaaatatcagtagatatactaatgtaagatgtcctgagtgtcataaaaagcta
gaactaagaggagaaggagaagggcaaatttatgtatgtccaaaatgtacatttagagaa
aagctttcatcctttaataatagatttaaagaaaaaggagataatgcagataaaagagaa
gtatcaaaatatatgagaaagatgaaagaacaagaaaaacaacctataaattcagcttta
gcagatgcgttatcaaaattaaatttaaagtaa

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