Clostridium cochlearium: SAMEA4530647_1897
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Entry
SAMEA4530647_1897 CDS
T06756
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ccoh
Clostridium cochlearium
Pathway
ccoh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SAMEA4530647_1897 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccoh03400
]
SAMEA4530647_1897 (ruvB)
Enzymes [BR:
ccoh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SAMEA4530647_1897 (ruvB)
DNA repair and recombination proteins [BR:
ccoh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SAMEA4530647_1897 (ruvB)
RecFOR pathway proteins
SAMEA4530647_1897 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
TIP49
Mg_chelatase
nSTAND3
RNA_helicase
AAA_14
AAA_22
Sigma54_activ_2
Bac_DnaA
NTPase_1
DUF815
AAA_18
bpMoxR
MCM
AAA_3
Sigma54_activat
AAA_2
NB-ARC
AAA_24
TsaE
ABC_tran
AAA_17
KAP_NTPase
DUF5529
AAA_28
IstB_IS21
Parvo_NS1
AAA_19
NACHT
Rad17
AAA_25
Zeta_toxin
DUF6374
AAA_11
Motif
Other DBs
NCBI-ProteinID:
SNV85749
LinkDB
All DBs
Position
1:complement(1858929..1859960)
Genome browser
AA seq
343 aa
AA seq
DB search
MLDNRFVTPLSIEEDADIEYNLRPTQLEEYIGQSKVREKLRIFIKAAKNRGESLDHVLLY
GPPGLGKTTLANIIAKEMKGNLKITSGPAIERAGDLAAILTTLNEHDVLFIDEIHRLNRA
VEEILYPAMEDYALDIVIGKGAAAKSIRLDLPQFTLIGATTRVGLLTAPLRDRFGVLCPM
EFYNEGELKDIIIRSSKILNIKIQEEAAYELARRSRGTPRIANRILKRVRDYSEVMGDGI
IDLNMTNKALELLEIDKEGFDSIDTKILKAILDNFNGGPVGLETLAYFIGEELDTIEDVY
EPYLLQKGFIMRTPRGRVATEKTYKHFKRDIKKENINQYKFKI
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgttggataatagatttgtaacccccttaagtattgaagaagatgcagacattgaatat
aatttaagacccactcagttagaagaatatataggtcagagtaaggtaagagaaaaactt
agaatatttataaaagctgctaaaaatagaggtgaatctttagaccatgtattattatac
ggtcctcccggattaggaaagactactttggcaaatataatagctaaagagatgaaggga
aatttaaagataacttctggtccggctatagaaagggcaggggatttagcagctatttta
acaactctaaatgaacatgatgtgctttttatagatgaaattcacagattaaatagagca
gtagaagaaatattgtatcctgccatggaagattatgctttagatatagttattggaaaa
ggggctgctgccaaatccataagattagacttaccacagtttactcttataggggctact
acaagggtagggcttttaacagcacctctaagagatagatttggggttttatgtcctatg
gaattttataatgaaggggaattaaaggatattataataagatcttctaaaatattaaat
ataaaaatacaggaagaggcggcttatgagttagcaaggcgctctcgtggaactccaaga
attgcaaataggatattaaagagggtaagagactattcggaagttatgggagatggaata
atagatttaaatatgactaataaagcattagaacttttagaaatagataaagagggattt
gatagtatagacaccaagatattaaaggctatactagataatttcaatggaggaccagta
ggattagaaactcttgcttattttattggtgaagaattagatacgatagaagatgtttat
gaaccgtatttacttcagaagggatttattatgagaactcctaggggaagggtagcaact
gaaaagacctataagcattttaaaagagatataaaaaaagaaaatataaaccaatataaa
tttaaaatatag
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