Campylobacter coli RM5611: YSU_05185
Help
Entry
YSU_05185 CDS
T03167
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ccoi
Campylobacter coli RM5611
Pathway
ccoi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccoi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
YSU_05185
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccoi01007
]
YSU_05185
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccoi03016
]
YSU_05185
Enzymes [BR:
ccoi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
YSU_05185
Amino acid related enzymes [BR:
ccoi01007
]
Aminoacyl-tRNA synthetase
Class I (U)
YSU_05185
Transfer RNA biogenesis [BR:
ccoi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
YSU_05185
Prokaryotic type
YSU_05185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1e
tRNA-synt_1_2
tRNA-synt_1f
Perilipin
EXS
HypA
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
AHK75254
LinkDB
All DBs
Position
1016214..1018826
Genome browser
AA seq
870 aa
AA seq
DB search
MYDKSIEKTYYQICEERGYFEIDGNKAIQEKNKNFCIMMPPPNVTGVLHIGHALTFTLQD
IMTRYKRMDGYKVLYQPGLDHAGIATQNVVEKQLLAQGIKKEELGREKFIEKIWEWKEQS
GGKILDQMRTLGITPAWSRLRFTMDEGLANAVKKAFVELYDKKLIVRGNYMINWCTHDGA
LSDIEVEYKENKGKLYHIKYYLKDSDEYLVVATTRPETFFGDTAVMVHPDDERYKQFIGK
ELILPLSNKAIKIIADEHVEKEFGTGVVKVTPAHDMNDYEVGLRHNLEFISVFDEKGILN
EHCLEFKGLERLEARDKIVAKLDSLGFIDKIEEHNNQVGYCYRCNNIVEPYISKQWFVKQ
EIAKESIEKVALGESKFYPSHWVNSFNAWMKDLRAWCISRQLWWGHQIPVYYCECSHEWA
SQDTPKACPKCGGQNFKQDEDVLDTWFSSGLWAISTLGWGNDTWGKDKIWFEEDLKEFYP
NSLLITGFDILFFWVARMMFQSTNALGALPFKDIYLHALVKDEQGRKMSKSLGNVIDPNE
SIKEYSADILRFTLALLAIQGRDIKLSNDKLLQVRNFTNKIYNATNYLLLNEEQFEDLEK
IELKSALAQFVYSRFQDCVKNVRENLDNYRFNDAANTLYKFFWDDFCDWGIELSKAQKES
VKELGSIFKEALKLLNPFMPFISEYLYHKLSKSELKTSASIMISKYPQFHAKNSNIEEIF
SLIIESIVSIRRAKSLVDLGNSKIEKAYIKLNDKKMQDEIKSYMKFITMLAKCENIEFTE
NKLQKAICDVSENLEIFITLNNVDLSGILTRLENQKTKLEKESTKLNAMLSNEKFIANAP
KEVVEQNKEALANLKTQLEKISAELANLKG
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgtatgataaaagcatagaaaaaacatattatcaaatttgcgaagagcgtgggtatttt
gaaatcgatggaaataaagccatacaagaaaaaaataaaaatttttgtatcatgatgcca
ccgcctaatgtaacaggcgttttacacataggccatgctttaacctttactttgcaagat
attatgacacgatataagagaatggatggctataaagttctttatcaaccaggacttgac
catgcaggaattgccactcaaaatgttgtagaaaaacaacttcttgctcaaggcattaaa
aaagaagaattgggtcgtgaaaaatttatagaaaaaatttgggaatggaaagaacaaagc
ggtggaaaaatcctagatcaaatgagaactctaggaattactcctgcttggagccgcttg
cgttttactatggatgaaggcttagcaaatgctgtaaaaaaagcttttgtggaactttac
gataaaaaacttatcgtgcgtggaaactatatgatcaattggtgcactcacgatggagct
ttaagtgatatagaagtagaatacaaagaaaacaaaggcaaactttatcatataaaatat
tatttaaaagatagtgatgaatacctagtcgtagcaacaacgcgtcctgagacttttttt
ggtgatactgcagtcatggttcatcctgatgatgagcgttataaacaatttataggaaaa
gaactgatcttgcctttgagcaataaagccattaaaatcatagctgatgaacatgtagaa
aaagaatttggaacaggggttgtaaaggttacccctgctcatgatatgaatgactatgaa
gtaggacttagacataatttagaatttataagtgtttttgatgaaaaaggaattttaaac
gagcattgtttggaatttaaaggcttagaacgattagaagctagagataaaattgtagct
aaactggatagtcttggctttatagataaaatagaagaacataacaatcaagtaggatat
tgctatcgttgcaacaatatagtcgaaccttatatttcaaaacaatggtttgtaaagcaa
gaaatcgccaaagaaagtatagaaaaagtagctcttggcgagagtaaattttatccaagc
cattgggttaatagctttaatgcttggatgaaagatttaagggcttggtgtatttcaaga
caactttggtggggacatcaaattcctgtgtattattgtgaatgctcgcatgaatgggca
agtcaagatacaccaaaagcttgtccaaaatgcggagggcaaaatttcaaacaagatgaa
gatgtactcgatacttggttttcttcgggactttgggcaataagtacacttggatgggga
aatgatacttggggaaaagataaaatctggtttgaagaagatttaaaagaattttatcct
aattctttattgataaccggttttgatattttgtttttctgggtagctagaatgatgttt
caaagtacaaatgctttaggggctttaccttttaaagatatttatttacacgctcttgtt
aaagatgagcaaggtagaaaaatgagtaagagtcttggaaatgttattgatccaaatgaa
agcattaaagaatatagcgccgatatcttgcgtttcaccttagccttgcttgctatacaa
ggacgcgatatcaagcttagcaatgacaaacttttacaagttagaaatttcacaaataaa
atctataatgcgacaaattatctacttttaaatgaagagcaatttgaagacttagaaaag
atagaacttaaaagcgcattagctcaatttgtttattctagatttcaagattgtgtaaaa
aatgtgagagaaaatttagacaattatcgctttaatgatgctgcaaacacactttataaa
ttcttctgggatgatttttgcgattgggggatagaacttagcaaagctcaaaaagaatca
gtaaaagaactaggaagcattttcaaagaggctttaaaactcttaaatccttttatgcca
tttatcagtgagtatctgtatcacaagcttagtaaaagtgaacttaaaacaagtgcctcc
ataatgataagcaaatacccacaatttcatgcaaaaaattccaatatagaagaaattttc
tctttgatcatagaaagcattgttagcatacgccgcgctaaaagccttgtggatttagga
aattcaaaaatagaaaaagcctatattaaattaaatgataaaaaaatgcaagatgaaatc
aaatcctatatgaagttcatcaccatgcttgccaaatgcgaaaatatagaatttacagaa
aacaaactacaaaaagccatttgcgatgtaagtgaaaatttagaaattttcatcacgctt
aataatgtagatttaagcggtattttaacaaggcttgaaaatcaaaaaacaaagctagaa
aaagaaagtaccaaactaaatgctatgttgtcaaatgaaaaatttattgccaatgcgcct
aaagaagtcgtagaacagaataaagaagctttggcaaatttaaaaactcagcttgaaaaa
atatcagctgaactagcaaatttaaaaggttaa
DBGET
integrated database retrieval system
