Campylobacter coli RM5611: YSU_06710
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Entry
YSU_06710 CDS
T03167
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ccoi
Campylobacter coli RM5611
Pathway
ccoi00470
D-Amino acid metabolism
ccoi00550
Peptidoglycan biosynthesis
ccoi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccoi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
YSU_06710 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
YSU_06710 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ccoi01011
]
YSU_06710 (murD)
Enzymes [BR:
ccoi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
YSU_06710 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ccoi01011
]
Precursor biosynthesis
Amino acid ligase
YSU_06710 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
HODM_asu-like
DUF2387
Motif
Other DBs
NCBI-ProteinID:
AHK75533
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Position
1318996..1320204
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AA seq
402 aa
AA seq
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MRISLFGYGKTTQAIAKNLANQFGPFDIYDDHFQEKSKDKWGNHLLNPKEFDEKVSELEI
PSPGFPPNHNLIKKAKNLQSEYDFFYDAMPKSVWISGTNGKTTTTQMATHLLSHVGAVMG
ANVGFPLAELDLNAKIWILETSSFTLHYTHTAKPEIYALLPISADHLSWHGSFENYAKDK
LSVLERMNECDIAILPEIYAKTPTKAYIISYKDEFDLAQKMGIDIEKISFKSPFLLDAVM
ALSIEKILLDSLSYELLNQFIMEKNKLEELQDSQGRLWVNDTKATNENAVMAALNRYKNK
KIHLIVGGDDKGVDLSALFNFMKNFNIELYAIGLSTQKMLDYALKANLKARKCEFLENAV
QEISKTLKNNEVALLSPACASLDQFSSYAQRGEKFKECVGKI
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgagaatttcactttttggatatggtaaaaccacacaggcaatagctaaaaatttagcc
aatcaattcggcccttttgatatctacgatgatcattttcaagaaaaaagcaaggataaa
tggggtaatcatcttttaaatcctaaagaatttgatgaaaaagtaagcgagcttgaaatt
ccaagccctggctttccacctaaccataaccttataaaaaaagcaaaaaatttacaaagc
gaatatgattttttttatgatgctatgccaaaatctgtttggatcagtggtacaaatggt
aaaaccacaaccacacaaatggctacacatctactttcacatgttggagcagtaatggga
gcaaatgtcggttttcctctggctgagcttgatttaaatgccaaaatttggatacttgaa
acttcatcttttacacttcactatacccatactgcaaaacccgaaatttatgcacttcta
cctataagtgcggatcatctttcatggcatggaagctttgaaaattatgcaaaagataaa
ttgagcgttttagaaagaatgaatgagtgtgatattgcaatcttgcctgaaatttacgca
aaaacacctacaaaagcttatattatctcttacaaagatgaatttgatcttgctcaaaaa
atgggtatcgatatagaaaaaatatcttttaaaagcccttttttgcttgatgctgtcatg
gctttaagtatagaaaaaattctacttgatagtctaagctatgaacttttaaatcaattt
atcatggaaaaaaataaactcgaagaattacaagatagtcaaggtagactttgggtcaat
gatactaaagcgaccaatgaaaacgctgtaatggccgctcttaaccgctataaaaataaa
aaaattcatcttattgtgggcggcgatgataagggtgtggatttaagcgctttatttaat
tttatgaaaaatttcaacatagaactctatgctataggacttagcactcaaaaaatgctt
gattatgctttaaaagcaaatttaaaagctcgtaagtgtgaatttttagaaaatgctgta
caagaaatttccaaaacgctaaaaaacaatgaagtagctttattaagccctgcttgtgca
agcttagatcaattcagctcttatgctcaacgtggagaaaaatttaaagaatgtgtaggt
aaaatttaa
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