Campylobacter coli 76339: BN865_15970c
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Entry
BN865_15970c CDS
T02811
Name
(GenBank) DNA-directed RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
ccol
Campylobacter coli 76339
Pathway
ccol03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ccol00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BN865_15970c
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccol03021
]
BN865_15970c
03400 DNA repair and recombination proteins [BR:
ccol03400
]
BN865_15970c
Enzymes [BR:
ccol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BN865_15970c
Transcription machinery [BR:
ccol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BN865_15970c
DNA repair and recombination proteins [BR:
ccol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BN865_15970c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
CDG57779
LinkDB
All DBs
Position
complement(1539819..1543946)
Genome browser
AA seq
1375 aa
AA seq
DB search
MLDNKLRNRLRVDFSNISKQIEIPNLLQLQKASFDYFLNLENGESGIEKVFKSIFPIHDP
QNRLSLEYVSSEIGKPKYTIRECMERGLTYSVNLKMKIRLTLHEKDEKTGEKVGIKDIKE
QEIYIREIPLMTDRVSFIINGVERVVVNQLHRSPGVIFKEEESSTVVNKLVYTAQIIPDR
GSWLYFEYDAKDVLYVRINKRRKVPVTMLFRALGYKKQDIIKLFYPIQTIHVKKDKFLTE
FNPNDFMDRIEYDIKDEKGKVVHQAGKRLTKKKAEQLIKDGLKWIEYPVEVLLNRYLANP
IIDKESGEVLFDSLTLLDESKLVKIKEQKSFEIANDLANGVDAAIINSFAQDNETLKLLK
QSENIDDENDLAAIRIYKVMRPGEPVVKDAAKAFVNDLFFNPERYDLTKVGRMKMNHKLG
LEVPEYVTVLTNEDIIKTAKYLIKVKNGKGHIDDRDHLGNRRIRSIGELLANELHLGLAK
MQKAIRDKFTSLNADIDKVMPYDLINPKMITTTIIEFFTGGQLSQFMDQTNPLSEVTHKR
RLSALGEGGLVKERAGFEVRDVHATHYGRICPVETPEGQNIGLINTLSTYAKVNELGFVE
APYRKVENGRVTDQVVYLTATQEEGLFIAAASTKVDAKGNIVEEFVEARQDGETILARRE
EVQLIDLCSGMVVGVAASLIPFLEHDDANRALMGSNMQRQAVPLITSSAPIVGTGMENII
ARDAWEAIKAKRGGVVEKVDNKSIFILGEDEKGPFIDHYIMEKNLRTNQNTNFMQHPIVK
KGDVVKAGQIIADGPSMDQGELAIGKNALIAFMPWNGYNYEDAIVVSERIIREDTFTSVH
IYEKEIEARELKDGIEEITKDIPNVKEEDVAHLDESGIAKIGTHIKPGMILVGKVSPKGE
VKPTPEERLLRAIFGEKAGHVVNKSLYATASLEGVVVDVKIFTKKGYEKDDRALKSYDKE
KMSLEKEHHDRLLMMDREEMLRVCALLSKSALMSDQKIGDKNYTKGQKASLEDLEKINRF
TLTTLIKAYSKEVQKEYEELKNHFQNEKKKLKAEHDEKLEILEKDDILPSGVIKLVKVYI
ATKRKLKVGDKMAGRHGNKGIVSTIVPEVDMPYLPNGKSVDIALNPLGVPSRMNIGQILE
SHLGLVGLRLGDQIQEIFDRKQKDFIKELRAKMLEICSIPRLANEKEFIKNLSDEELLNY
ARDWSKGVKFATPVFEGVNIEEFAKLFEIAKIDMDGKTELYDGRTGEKIAERVHVGCMYM
LKLHHLVDEKVHARSTGPYSLVTQQPVGGKALFGGQRFGEMEVWALEAYGAAHTLREMLT
IKSDDVEGRFSAYKALTKGENVPATGIPETFFVLTNELKSLALDVEIFDKDEDNE
NT seq
4128 nt
NT seq
+upstream
nt +downstream
nt
atgttagacaataaattaagaaatcgtttaagagtagatttctccaatatttcaaagcaa
atagaaattccaaatcttctccaacttcaaaaagcaagttttgattattttttaaatctt
gagaatggcgaaagtggaatcgaaaaagtttttaaatcaatctttcctatccatgatcca
caaaataggttaagtcttgagtatgttagcagcgaaattggaaaaccaaaatacacgatt
cgtgagtgtatggaaagaggtttgacttactctgtaaatttaaaaatgaaaatccgtctt
actctacatgaaaaagatgagaaaacaggtgaaaaagttggtataaaagatatcaaagag
caagaaatttatatcagagaaattccattgatgacagatagagtttcttttattatcaat
ggggttgaaagagttgtggttaaccagcttcatagaagcccaggcgtaatctttaaagaa
gaagaaagctcaactgtcgttaacaagcttgtatacactgcacaaattattcctgatcgc
ggttcttggctttattttgaatacgatgctaaagatgtattatatgtaaggattaataaa
agaagaaaagtgccagtaacaatgctttttagagctttgggatataaaaaacaagatatt
attaaattattttatcctattcagacaattcatgtaaaaaaagataaattcttaacagaa
tttaatccaaatgattttatggatagaatagaatatgatatcaaagatgaaaaaggaaaa
gttgttcatcaggctggaaaaagactgactaagaaaaaagctgaacagcttattaaagat
ggtttaaaatggatagaatatccagtagaagttttattaaaccgttacctagctaatcct
attattgataaagaaagtggtgaagttttatttgactctcttaccttacttgatgaaagt
aaacttgttaaaattaaagaacaaaaaagctttgagatagctaacgatttggcaaatgga
gtggacgcagctattatcaactcgtttgcacaagataatgaaactctaaaattattaaaa
caaagtgaaaatatcgacgatgaaaatgatttagcagctattagaatttataaagtaatg
cgtccaggcgaacctgttgtaaaagatgcagctaaagcttttgttaacgatttatttttt
aatcctgaaagatacgatcttaccaaagtaggtcgtatgaaaatgaatcataaactagga
cttgaagttccagaatatgtaacagttctaactaatgaagatattatcaaaactgcgaaa
tatttgattaaagtaaaaaatggtaaaggtcatatcgatgatagagaccatttaggaaat
cgtcgtattcgatctatcggggagcttttagcaaatgaacttcatttaggtcttgccaaa
atgcaaaaggctataagagataaatttacttctctaaatgcagatatagacaaagtaatg
ccttatgatttgatcaatcctaaaatgatcacaacaaccatcatcgaattctttacaggt
ggacaactttcacaatttatggatcaaaccaatcctctaagtgaagttacacataaacgc
cgtctatcagcattaggagagggtggtcttgttaaggaaagagcgggttttgaagtgcgt
gatgttcacgcaacgcattatggtaggatttgtcctgttgaaactccagaaggacaaaat
atcggtttgatcaataccttatctacttatgctaaagtaaatgagcttggatttgttgaa
gctccttatagaaaagtagaaaatggaagagtaacagatcaggttgtgtatttaacggct
actcaagaagaaggattattcatcgctgcagcttctacaaaagtagatgctaaaggtaat
atagtggaagaatttgttgaagcaagacaagatggagaaactatacttgcaagacgcgaa
gaagtgcagcttatagatctttgttcaggtatggttgtgggtgttgctgcttctttgatt
ccatttttagagcatgatgatgcaaatagggcattaatgggttcaaacatgcaacgtcaa
gctgttccgcttataacttcttcagcacctattgttgggacaggtatggaaaatatcatt
gctcgtgatgcttgggaagctataaaagctaaaagaggcggagtagttgaaaaagtagat
aacaaaagcatatttatccttggtgaagatgaaaaaggtccatttatagatcattatatt
atggaaaaaaatcttcgcacaaaccaaaatacaaattttatgcaacatcctattgttaaa
aagggagatgtggttaaagcagggcaaattatagctgatggtccttctatggatcaaggt
gaacttgctatcggaaaaaatgctttgattgcttttatgccttggaatggatataactac
gaagatgctatagtagtaagcgaaagaattatacgcgaagatacttttactagtgttcat
atttatgaaaaagaaatagaagctagagaattaaaagatggtatagaagagattactaag
gatataccaaatgttaaagaagaagatgttgcacatttggatgaaagcggtatagcaaaa
attggtacccatataaaaccaggtatgattttagtaggtaaggtttctccaaaaggtgaa
gttaagccaacgcctgaggaaagacttttaagggcaatttttggtgaaaaagctggccat
gtggtgaataaatctctttacgctactgcctctttagaaggtgtagttgttgatgtaaaa
attttcaccaaaaaaggatatgaaaaagacgatagagctttaaaatcatatgataaagaa
aaaatgtccttagaaaaagaacatcatgatagacttttaatgatggatagagaagagatg
ttgcgcgtttgtgcgttgctttctaaatctgctttaatgagtgatcaaaaaataggtgat
aaaaactatacaaaaggacaaaaagcaagtctagaggatttggaaaaaatcaatcgtttt
actttgactactttaattaaagcttattctaaagaagttcaaaaagaatacgaagaatta
aaaaatcatttccaaaatgagaagaaaaagcttaaagctgagcacgatgagaagcttgaa
attttagaaaaagatgatattttaccaagtggagtaattaagcttgttaaggtatatatc
gcaacaaaacgcaagcttaaagtgggcgataaaatggcaggacgtcacggaaacaaaggt
atagtttctactatagtacctgaagtggatatgccttatttaccaaatggaaaaagtgta
gatatcgcacttaacccacttggggttccaagtcgtatgaatataggacaaattttagaa
agccatttaggtcttgtaggacttagactgggtgatcaaattcaagaaatttttgacaga
aaacaaaaagatttcattaaagaattaagagcaaaaatgcttgaaatatgttctattcca
agacttgcaaatgaaaaagaatttattaaaaatttaagcgatgaagagcttttaaattat
gcgagagattggagcaagggtgttaaatttgcaactcctgttttcgaaggggtaaatata
gaagagtttgcaaaactttttgaaatagcaaagattgatatggacggtaaaacagagctt
tacgacggtcgtaccggagaaaaaatcgctgagagagttcatgtgggatgtatgtatatg
ttaaaacttcaccatttagttgatgaaaaagttcatgctagaagtacagggccttatagt
ttggttactcagcagcctgtgggtggtaaagcactctttggtggacaaagatttggtgaa
atggaggtttgggcactcgaagcttatggggcagctcatactttaagagagatgcttact
ataaaatctgatgatgttgaaggtagattcagtgcctataaagcacttactaaaggagaa
aatgtcccagcgacaggaattccggagacattttttgtattgactaacgaacttaaatct
ctagctttagatgttgagatttttgataaggatgaagacaatgagtaa
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integrated database retrieval system
