Cronobacter condimenti: AFK62_10520
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Entry
AFK62_10520 CDS
T04060
Name
(GenBank) RNase II stability modulator
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
ccon
Cronobacter condimenti
Pathway
ccon02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ccon00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AFK62_10520
Enzymes [BR:
ccon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
AFK62_10520
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
GGDEF_2
PAS_10
Motif
Other DBs
NCBI-ProteinID:
ALB62912
LinkDB
All DBs
Position
2306441..2308435
Genome browser
AA seq
664 aa
AA seq
DB search
MKDDLENNLLYRYSGAASPYWRLPLDSNALQLAATEAAATSHVVPLTPEQAAQIRAMGVI
TSSVTLSLSLFGELVPVHLVGRKVSRKEWEGTASAWNDTTSVARDLVQGLSFAEQVVSEA
NSVIVILDRHGNIQRFNRLSEEYTGLKEQEVIGQNVFKLFMTPAEASASRRNITGFFRNG
SSYEVERWVKTRKGQRLFLFRNKFVHSGSGRNEIFLICSGTDITEERRAQERLRTLANTD
AITGLPNRNAIHEMISDAITRRGDTQVGIVYLDLDNFKKVNDAYGHMFGDQLLQAVSLAI
LSCLEKDQVLARLGGDEFIVLATDTSQAALEAMSSRIITRLKHPFRIGLIEVYTGCSLGI
ALAPQHGDDRESVIRNADTAMYTAKENGRGKFCVFCPEMNQRVFEYLWLDTNLRKALEKN
QLVIHYQPKITTQGEVLSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVMLDVV
RQIAKWREAGIMLRVAVNVSARQLADQTLLSDLRQALADMRFSKSPIDVEITESCLIENA
ELALSVINEFSTLGAEVHLDDFGTGYSSLSQLARFPLDAIKLDQSFVRDIHKQPVSQSLV
RAIVAVAQALDLQVIAEGVESHEEDAFLTQNGVDARQGFLFARPMTAGAIERWYRRYRAR
KQTP
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgacctggagaataatctgctgtaccgctattccggcgcggcaagcccctac
tggcgcctgccactggacagtaacgcgttacagcttgccgcgacggaagcggccgccacc
agtcatgtggtaccgctgaccccagaacaggccgcgcaaatccgtgccatgggggtcatc
acctcaagcgtcacgctatcgctgtcgctgttcggcgaactggtgcccgttcatctggtg
ggccgaaaagtttcccgcaaagaatgggaaggtacagcgtctgcgtggaacgacacgaca
tccgtggcgcgcgacctggtgcagggcctgtcgtttgcagagcaggtcgtgtcagaggct
aattcggtcattgtcattctggatcgccacggcaatattcagcgtttcaaccgtctgagc
gaagagtacaccggcctgaaagagcaggaagtcatcgggcagaacgttttcaaactcttt
atgacgcccgccgaagcctcggcttcgcgccgcaatatcaccggtttttttcgcaatggc
agttcttatgaggttgaacgttgggtcaaaacccgcaaaggccagcgcctctttctgttt
cgcaataaatttgttcacagcggtagcggcagaaatgaaatctttctcatctgctccggt
accgatatcactgaagagcggcgcgctcaggagcgattacgcacgcttgccaatactgac
gccattaccggcctgccaaaccgcaacgccattcacgagatgataagcgatgctatcacc
cgtcgtggcgacacccaggttggcattgtctatctcgatctcgataacttcaaaaaggtg
aacgatgcctacgggcatatgtttggcgaccagttattgcaggccgtgtcgcttgcgata
ttaagctgccttgagaaagaccaggtcctggcgcgcctcggtggcgatgaatttatcgtg
ctggcgaccgacacgtctcaggcggcgctggaggcaatgtcctcgcgcatcatcacccgg
cttaagcatccgtttcgcatcggccttatcgaagtctataccggctgttcgcttggcatc
gcgcttgcgccgcaacacggtgacgatcgcgaaagcgttatccgtaacgccgacacggcg
atgtatacggccaaagagaacggacgtggcaaattctgcgtcttctgcccggaaatgaac
caacgggtgtttgaatatctctggctggacacaaatctgcgtaaggcgcttgagaagaac
caactggtcattcactaccagcccaaaatcacaacacagggtgaagtgctcagtctggaa
gcactggtgcgctggcagtcgccggagcgcgggctgatcccgccgctggattttatctcg
tatgctgaagaatccgggcttatcgtgccgctcgggcgttgggtcatgctggacgttgtg
cgtcagatagcgaagtggcgcgaggcgggcattatgcttcgcgtcgcggtgaatgtgtca
gcacgccagctcgccgatcagacgctgttgagcgatctgcgccaggcgcttgccgatatg
cgcttctcaaaaagccctattgatgtggagataaccgaaagctgcctgatcgagaatgcc
gaactggcactgtcggtgattaatgaattcagcacgctcggtgccgaagtgcatctggat
gattttggcaccggctattcatcgctttcacaactggcgcgctttccactcgatgccata
aaactcgatcaaagctttgtgcgcgatatccataaacaaccggtgtcgcagtcgctggta
cgcgctatcgtcgctgtggcgcaggcgctcgatctgcaggtgattgccgaaggcgtggag
agccatgaggaagatgcctttctgacgcaaaacggggtcgatgcgcgtcagggctttttg
tttgcaagacccatgaccgcaggcgcgatagaacgctggtataggcgctatcgggccagg
aaacagacgccgtaa
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