KEGG   Chondrus crispus (carragheen): CHC_T00000546001
Entry
CHC_T00000546001  CDS       T02916                                 
Name
(RefSeq) hypothetical protein
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
ccp  Chondrus crispus (carragheen)
Pathway
ccp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ccp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CHC_T00000546001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccp03400]
    CHC_T00000546001
Enzymes [BR:ccp01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     CHC_T00000546001
DNA repair and recombination proteins [BR:ccp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CHC_T00000546001
 Prokaryotic type
     CHC_T00000546001
SSDB
Motif
Pfam: HhH-GPD HHH
Other DBs
NCBI-GeneID: 17325804
NCBI-ProteinID: XP_005718085
UniProt: R7QLC8
LinkDB
AA seq 473 aa
MSTRAVCFGLTTLTNIRGIRYSSFRVDPPFTSNRRPRSLVFGNFTTILHLTRNRAISTIP
YPHQTSKRTTSAKTTPNMARKGTKDDDIEAADVHAMLKKGSLIMKRLEEVYPQAPEGFLD
HSDPFTLLVAVVLSAQSLDIKVNEITPELFRVGGTPEDMRELGENNIREIIKQIGLAPQK
AKNLAKLSADIVDKFQGKVPDNFDDLESLAGVGHKTASVIMMQAFQKPAFPVDTHIHRLA
CRWGCGDAKSVMKTEESLKKWFPDPETWGQLHTRIILFGREYCPARNHNMEDCPICSFAA
TDEAWNNNRLFPKKFTAPTSHKNRYSIRDLPPPEKGDQVLYTPPSKTKTTRKTNRNTVAR
AATKIVEQVQVRKSGRRKTPVSYVETEKDATKGPQTPGNEKKTSGQRGKGKRKKAAEMVE
EQDATAAENAKPAKRSKRHPGGSKSTYKNDLSLDLTQHKRRKSSRIQQKNENE
NT seq 1422 nt   +upstreamnt  +downstreamnt
atgtcgacaagagcggtctgcttcggtctgactacgttgacaaatattcgcgggattaga
tattcttcatttcgagttgaccccccgttcacatcgaatagacgtcctcgcagcctcgtt
ttcggaaactttaccaccattctgcatttgacaaggaatcgcgccatatctacaatacct
tatccgcaccaaacatcgaaaaggaccacatcggccaagaccacgcccaacatggctcgg
aaaggaaccaaggatgatgacatcgaggccgcagatgtgcatgcaatgttgaaaaagggc
agtctgatcatgaaaaggctcgaggaagtgtatccacaagctcccgaaggattcttggat
cactcggatccctttaccttgctggtagctgtcgtcctatcggcccagtcactggacatc
aaagtgaatgaaataacccccgaactgtttcgagtcgggggcacgcccgaggacatgcgc
gagcttggcgagaacaacatccgtgaaatcattaagcaaattggcctggccccgcagaag
gcaaagaatcttgcaaagctctcagcagacattgtcgacaagtttcaaggcaaagtccca
gacaattttgacgatctagagagtcttgctggagtaggacacaagactgcgagtgttatc
atgatgcaagcttttcaaaaaccagcatttccggtggacactcacatccatagattggca
tgccgatgggggtgcggcgatgccaaatctgtcatgaaaacggaagagtcgttgaagaaa
tggtttccagatccggagacgtggggtcaactacacactcgcataatcctgtttggaaga
gagtactgcccagctcgaaaccataacatggaagactgtcccatttgctcttttgccgcc
acggatgaggcttggaacaataatcgcttgtttcctaagaaattcactgccccaacttca
cacaaaaatcgatattcaattcgggatttacctcctccagagaagggggatcaagtgtta
tatactccgccgtccaaaacgaagaccactcgcaaaacaaaccgtaacactgttgcccgt
gctgctaccaagattgtagagcaagtccaagttagaaagtctggccgtcggaagacgccc
gtatcgtacgttgaaacggaaaaggatgcaactaaggggccacaaacgccaggcaatgag
aagaaaacatctggacaacgcggaaaaggaaaaaggaagaaagccgctgagatggttgaa
gagcaggatgctacagcagcggaaaatgccaagccggcaaagcgatcgaaacgtcacccg
ggcggcagcaagtcgacatacaaaaatgatttgagtttagacctcacgcagcacaagcgc
aggaagagttcaaggattcagcagaagaacgagaatgagtaa

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