Chondrus crispus (carragheen): CHC_T00008673001
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Entry
CHC_T00008673001 CDS
T02916
Name
(RefSeq) Peptide chain release factor eRF, subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CHC_T00008673001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccp03019
]
CHC_T00008673001
03012 Translation factors [BR:
ccp03012
]
CHC_T00008673001
Messenger RNA biogenesis [BR:
ccp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
CHC_T00008673001
Translation factors [BR:
ccp03012
]
Eukaryotic type
Release factors
CHC_T00008673001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Motif
Other DBs
NCBI-GeneID:
17322043
NCBI-ProteinID:
XP_005714329
UniProt:
R7QAN7
LinkDB
All DBs
AA seq
441 aa
AA seq
DB search
MGEKDKAQDDDGDRAVQVWKIKKLIKALEQARGNGTSMISLIIPPRDQTSRVNKMLSDEY
GTASNIKSRVNRQSVLSAITSTQQRLKLYPKVPDNGLVIYCGTIMNDQNKEREVLVDFEP
FKPINTSLYLCDNKFHTEALASLLESDEKFGFIVMDGNGALFGLLTGNTRSVLHKFSVDL
PKKHGRGGQSALRFARLRLEKRHNFVRKVAEIAVTQFIPDGQKVNVTGLILAGSADFKTE
LYTSELFDQRLKAKVLKTVDVSYGGENGFNQAIDLSAETLGNVKFIQEKKLVQRYFDEIS
KDTNKYCFGVRDTMLALEQGAVEILIAWENMEHTRLELENPQTNEKVIKILSKQEMNDMS
HFVDQETKVELETREQEPFVDWMAAHYKDFGTTLEFITDRSQEGAQFVQGFGGIGGLMRY
EVNFEAFEEPEEDEDWEDLLA
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaaaaggacaaggcacaggacgacgatggagatcgcgccgttcaggtctggaag
atcaagaagctcattaaagcactagagcaggcccgtggtaacggaacaagcatgatctca
ctaattatccctcctcgagatcaaacctcccgcgttaacaagatgctcagtgacgagtac
gggaccgcttcaaatatcaagtcccgtgtcaaccgtcaatccgttctcagtgccatcacc
tcaactcagcagcgtctcaagctctaccccaaggtacctgacaacggactcgttatctac
tgtggtacaattatgaacgaccagaacaaggagcgtgaggtccttgttgactttgaaccg
tttaagcccatcaacacttctctgtatttgtgcgataacaaattccacacagaggctttg
gcgagtctactagaatctgacgagaagtttggctttatcgtaatggacggaaatggtgct
ttgttcggcttgttgacaggcaacacccgatccgttcttcacaagttttccgttgatctt
ccgaagaagcacggtcgcggaggtcagtccgcattgcgttttgctcgcctgcggttagag
aagcgccataactttgtccgaaaagtagcagaaatcgcagttacccagttcattccggat
ggtcaaaaggtcaacgtcactggtcttattcttgcgggttccgcagacttcaaaacagaa
ctgtatacttcagaactatttgaccagcggctgaaggccaaggtcttgaagacggtagat
gtcagctatggaggcgaaaatggcttcaaccaggccattgacctctcagcagagacactt
ggcaatgtcaagtttattcaggaaaagaagcttgtacaaaggtatttcgacgaaatttcc
aaagacacaaacaagtattgcttcggcgtaagggatactatgttggcgttggagcaaggt
gctgttgagattcttattgcttgggagaatatggaacacaccaggcttgagcttgaaaat
ccacagacaaatgaaaaggtcatcaagatcttgagcaagcaggaaatgaatgacatgtca
catttcgttgatcaggaaacaaaggtcgaacttgagactcgggaacaagaaccttttgtc
gactggatggccgcgcattacaaggacttcggcacaactctagaattcatcaccgatcga
tcacaagaaggtgcacaatttgtgcagggctttggtggtatcggtgggttaatgcgatat
gaggtcaacttcgaagcgttcgaggagcctgaggaagacgaagactgggaggaccttttg
gcttag
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