Chondrus crispus (carragheen): CHC_T00009540001
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Entry
CHC_T00009540001 CDS
T02916
Name
(RefSeq) Isoamylase glycoside hydrolase family GH13, Hsp33
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
ccp
Chondrus crispus (carragheen)
Pathway
ccp00500
Starch and sucrose metabolism
ccp01100
Metabolic pathways
ccp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ccp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
CHC_T00009540001
Enzymes [BR:
ccp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
CHC_T00009540001
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Paralog
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Motif
Pfam:
Alpha-amylase
ISOA1-3_C
CBM_48
Isoamylase_C
pulA_all-beta
GHL5
Motif
Other DBs
NCBI-GeneID:
17319493
NCBI-ProteinID:
XP_005711786
UniProt:
R7Q452
LinkDB
All DBs
AA seq
717 aa
AA seq
DB search
MPGTAPKNPSARTVHAGRALPYGASPTSRGTNFAIYARETTSVALLLTVDATESVHPLDP
SLNRTGHVWHVELVPPVPAAAAYAWRVGRDKDPRWRSNVCLDPWATVLDSPVGPAAFNDR
SSKTEQYSPRALVAPPTVFDWQDVAKPRIAWKDMVIYELHVRGFSKRAPDIGPTKLKGSA
GSFVGVVERIPYLKSLGVNVVELLPVMEYNEREWSHINPESNKPLSQYWGYSTVAFFAPM
NRFGRDGSSPAQVLAEFKYMVRELHREGIEVILDVVYNHTAEMGLDFVGPGFYGMKTLAP
FSYYVLRDGGHTFVNHSGCGNTVNSNNPATQELICASLRYWAHEMGVDGFRFDLASILCR
GVDGEPLADPPIIERMTKDPTMRDVKLIAEPWDCGGLYQVGTFPHFGVWAEWNGKFRDCV
RRFVKGDGGMIGEFATRLCGSQDLYGDGRKPFHSINFITAHDGFSMHDLVAYDKKHNHQN
GENNNDGEAHNNSWNCGAEGDTSDGNILALRRRQMKNMLVALLVAAGTPMLTMGDEYGHT
KKGNNNGWCQDSELTWFDWGAAKADKHGLMRFTSKLVRLRRSVSSLQHDTFLSDRDIAWH
GSNGGQPDWKSSYNFLAMSFKGACEIYVAFNAGGESRDLQLPHVHGGWERVIDSNLEPPK
DFADEGQAAKLDGGSSYKIMPFSCLLLRQNGRDGEGQKLDDVVQAFESVEISNLPEA
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgccaggcacagcccccaaaaatccgtccgcgcgcacggtacacgccggccgcgcgctt
ccatacggcgcgtcgccgacttcccgcggcaccaacttcgccatctacgcgcgcgagacc
acctccgtcgccctgctactcaccgtcgacgccacggaatccgtccacccgctggacccc
tccctaaaccgcacgggccacgtgtggcacgtcgagctggtcccccccgtccccgccgcc
gcggcgtacgcgtggcgcgtgggccgcgataaggacccgcgctggcgctccaacgtctgc
ctcgacccgtgggccacggtcctcgattccccagtcggcccagccgcgttcaatgatcgt
agctcaaaaacggagcagtactccccgcgcgcgctcgtcgcgcccccgacggtgttcgat
tggcaggatgtagccaagccacgcatcgcttggaaggacatggtcatatacgagctgcac
gtgcgcggcttctcaaagagggctcccgatatagggcccactaaactgaaagggagtgcg
ggtagcttcgttggtgttgtggagaggatcccgtatctgaagagcctcggcgtcaatgtc
gtcgagctgctcccggtcatggagtacaatgagcgcgagtggagccacatcaaccccgaa
tctaacaagccgctcagtcagtactggggctattccaccgtcgccttcttcgccccgatg
aaccgcttcggccgcgacggctcgtcccccgcgcaggtactcgcagaatttaaatacatg
gtgcgcgagctgcatcgggagggcatcgaggtcatccttgacgtcgtgtacaatcatacc
gcagaaatggggctagacttcgtcggccccgggttttacggcatgaagacactcgccccg
ttttcttactacgtgctccgcgatggtggccacacctttgtcaatcactctggatgcggc
aacaccgtcaactcgaacaatccggccacacaggagctcatatgtgccagcttacgctac
tgggctcatgaaatgggtgtcgatggcttccgcttcgacctggccagcatattatgtcgt
ggtgtggatggcgagccgcttgccgacccccctattatcgaacgcatgacgaaagaccct
actatgagggacgtcaagcttatcgcggagccatgggattgtggtggcctttatcaggtt
ggcacctttcctcactttggtgtgtgggctgagtggaatggcaagtttcgggactgtgtg
cgccgttttgtcaaaggagatggtggtatgattggtgagtttgcaactcgcttatgcggt
tcgcaagacttgtatggcgacgggcgcaagcccttccactcgatcaattttatcacggca
catgacggcttttccatgcacgacttggtcgcatacgacaagaagcacaaccaccaaaat
ggtgagaacaataatgacggcgaagcgcataataattcttggaactgcggcgcggaaggt
gacacgtcggatggcaacattctcgcacttcggcggcggcaaatgaaaaacatgctcgtc
gcacttctcgtcgccgccggcacgcccatgctcactatgggagatgagtatggtcacact
aagaagggcaacaataacggctggtgccaggactcagaactgacttggtttgattggggg
gctgcgaaggccgacaaacatgggctcatgcggttcacctccaagctcgtgcgtctgcgc
cgttcagtgagttcgctgcaacatgacacatttttatccgaccgtgacattgcctggcac
ggaagcaatggcggacagccagattggaagtcctcttacaactttcttgccatgtcgttc
aagggtgcgtgtgagatatacgtagctttcaatgccgggggggaaagtcgagacctgcag
ctgccacatgtgcacggcggctgggagagggtcatagactccaaccttgaaccaccgaaa
gatttcgccgatgaagggcaggccgcaaagctggacggtggcagctcgtacaaaatcatg
ccattctcttgtcttcttttgcgccagaacggcagagatggggagggtcaaaaattggat
gacgtagtccaggcattcgaatctgttgaaataagcaaccttccggaggcgtga
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