Chondromyces crocatus: CMC5_047230
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Entry
CMC5_047230 CDS
T04010
Name
(GenBank) RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
ccro
Chondromyces crocatus
Brite
KEGG Orthology (KO) [BR:
ccro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccro03021
]
CMC5_047230
Transcription machinery [BR:
ccro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CMC5_047230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
DUF134
HTH_23
HTH_17
GerE
Motif
Other DBs
NCBI-ProteinID:
AKT40567
UniProt:
A0A0K1EIT2
LinkDB
All DBs
Position
complement(6354088..6354690)
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AA seq
200 aa
AA seq
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MSVMQLFGALVMPEKGEGRDRGEALLVQRLRRSDPAAVGAVYDQHHAAVRAFARRLLGDE
AAAEDLVHEVFVNLPNAMRRFEGNSSLRTFLISIAVNHARHHVRSATRNRAAMARYAREP
EASVQDPEHLAHRASLARALAGALDALPMEQRVAFVLFEVDEYTSREAAEIMGVPEATVR
TRVFHARQKLRALLEQQGIR
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgatgcagcttttcggagcgctggtgatgcccgagaaaggggagggtcgcgat
cggggcgaggcgctcctcgttcagcggctgcggcgcagcgatcctgcggccgtcggggcc
gtctacgatcagcaccacgcggcggtgagggcgttcgcgcggcgactcctcggggacgag
gcagcggccgaggatctggtgcacgaggtgttcgtgaacttgccgaacgcgatgcggcgc
ttcgaaggcaactcgtcgctgcggacgttcctgatctcgatcgcggtgaaccacgcacgg
caccatgtccgctcggcgacccgcaaccgggccgccatggcgcggtacgcgcgggagccg
gaggcctcggtccaggatccggagcacctcgcgcaccgggcctccctcgcccgcgcgctg
gcaggggcgctggacgcgctgccgatggagcagcgggtggcgttcgtgctcttcgaggtg
gacgagtacacgtcgcgggaagcggcggagatcatgggggtgccggaggccacggtccgg
acccgggtgttccatgcacggcagaagctccgagcgctcctcgagcagcaggggatccga
tga
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