Corvus cornix (hooded crow): 104686640
Help
Entry
104686640 CDS
T03546
Symbol
HMGCS1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw00280
Valine, leucine and isoleucine degradation
ccw00650
Butanoate metabolism
ccw00900
Terpenoid backbone biosynthesis
ccw01100
Metabolic pathways
ccw03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
104686640 (HMGCS1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
104686640 (HMGCS1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
104686640 (HMGCS1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
104686640 (HMGCS1)
Enzymes [BR:
ccw01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
104686640 (HMGCS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
Lectin_C_term
Cullin
Motif
Other DBs
NCBI-GeneID:
104686640
NCBI-ProteinID:
XP_010393526
LinkDB
All DBs
Position
Z:9989081..10000488
Genome browser
AA seq
645 aa
AA seq
DB search
MMVLLSVWVVGGFLNLYSLKQDTKIRHRSTVQIEVRCRGIVQNNNQNHTESLLKLGFWVL
ENSDLFPVGVFAPCQVPKPSTVSRFPQPRPVRAWRLPAHAQCSRRARAARQKPAMGFQSA
SATMPGSLPVNAESCWPKDVGIVALEIYFPSQYVDQTELEKYDGVDAGKYTIGLGQARMG
FCSDREDINSLCLTVVQKLMERNSLSYDCIGRLEVGTETIIDKSKSVKTVLMQLFEESGN
TDVEGIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDIAVYASGNARPTGGAGAV
AMLVGPNAPLIFERGLRGTHMQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDRCYTVYR
NKIHAQWQKEGTDRRFTLNDFGFMIFHSPYCKLVQKSVARLLLNDFLSDQNPETANGVFS
GLEAFRDIKLEDTYFDRDVEKAFMKASAELFNQKTKASLLVSNQNGNMYTPSVYGCLASL
LAQYSPEQLAGQRISVFSYGSGFAATLYSIRVTQDATPGSALDKITASLSDLKTRLDSRK
CIAPDVFAENMKLRQETHHLANYIPQCSVEDLFEGTWYLVRVDEKHRRTYARRPLMSDGP
LEARVGVVHPGIVHEHIPSPAKKVPRIPATTESEGVTVAISNGEH
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgatggttttgctcagtgtgtgggttgttgggggttttttaaatctgtatagtttgaag
caagatacgaagatacggcaccgctccactgtgcaaatagaagtgaggtgccgagggatt
gtccaaaataacaaccaaaaccacacagaaagccttctcaaactgggattttgggtgctg
gagaattcagatttatttcctgtcggggtttttgccccgtgccaggtgccgaagccaagc
acggtgtcccgattcccgcagccccgtcctgtacgggcgtggcgcctcccggcgcacgcg
cagtgctcgcggcgcgcacgcgcagcccgccagaagccggccatgggattccagagcgca
tctgccacgatgcctgggtctcttccagtgaatgctgagtcctgctggcccaaagatgtg
ggaattgtggcactggaaatctattttccctctcagtatgttgaccagaccgagctggag
aagtatgatggtgtggatgctgggaagtacaccattgggctaggccaggcaaggatgggg
ttctgctctgaccgggaagatatcaattccctctgcctgactgtggttcagaagctcatg
gagaggaacagcctctcctacgattgtatcgggagattagaagttggaacggagaccata
attgataaatcaaaatctgtgaagactgtcctgatgcagctttttgaagagtctggtaat
acagatgtggaaggaatcgacaccaccaatgcatgctatggaggcactgctgctcttttt
aatgctattaattggattgagtccagttcctgggatggacgctatgccctcgtggtggct
ggagacatcgctgtgtatgcctctggaaacgccaggcccactgggggagctggtgctgtt
gcaatgctggtcggcccaaatgcaccattgatttttgagagagggctgcgtggtacccac
atgcagcatgcgtatgacttctataaaccagacatggtctctgaatatcctgtagtggat
ggcaagctctccatacagtgctacctcagtgcattagaccgctgctataccgtctatcgc
aacaaaatccacgcccagtggcagaaggaggggacagacagacgtttcaccttgaatgac
tttggattcatgatcttccattctccgtactgtaaactggtgcagaaatccgtggctaga
ctcttgctgaatgactttctcagtgaccagaacccagaaacagcaaatggtgttttcagt
ggtctggaagctttcagggatataaaacttgaagatacatactttgacagagatgtggaa
aaagcttttatgaaagctagtgcagagctcttcaatcagaaaaccaaagcttcattactt
gtatccaatcagaatggaaatatgtataccccttcagtctatggttgccttgcctctctt
ctagcccagtactccccagagcagcttgcgggacagagaatcagtgtgttctcatatggc
tctggttttgctgctaccctgtattccatcagggtcacacaggatgccactcctggttct
gcactggacaaaataactgccagcctttctgatctcaaaacgagacttgactcaagaaaa
tgtattgcacctgatgtctttgctgaaaacatgaagctcagacaggaaacacatcatttg
gccaattatattccacagtgttcagtcgaggatctctttgaaggaacatggtaccttgtg
cgtgtggatgaaaaacacaggagaacttacgcccggcgcccactcatgagtgatggacct
ctggaagcaagagttggagttgtccacccaggcattgttcatgagcacatcccaagccct
gctaagaaagtgccaagaatccctgcaacaacagaatctgaaggcgttactgtcgccatt
tccaatggggagcattaa
DBGET
integrated database retrieval system
