Corvus cornix (hooded crow): 104687358
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Entry
104687358 CDS
T03546
Symbol
MIB1
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase MIB1
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccw04121
]
104687358 (MIB1)
Enzymes [BR:
ccw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104687358 (MIB1)
Ubiquitin system [BR:
ccw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104687358 (MIB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_5
SH3_15
MIB_HERC2
Ank_3
zf-C3HC4_3
ZZ
zf-C3HC4_2
Sina_RING
Prok-RING_4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
104687358
NCBI-ProteinID:
XP_039404191
LinkDB
All DBs
Position
2:106108940..106187327
Genome browser
AA seq
1006 aa
AA seq
DB search
MSSSRNNRVMVEGVGARVVRGPDWKWGKQDGGEGHVGTVRSFESPEEVVVVWDNGTAANY
RCSGAYDLRILDSAPTGIKHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTVCYHGDKHHL
RHRFYRITTPGSERVLLESRRKSKKITARGIFAGARVVRGVDWQWEDQDGGNGRRGKVTE
IQDWSASSPHSAAYVLWDNGAKNLYRVGFEGMSDLKCVQDAKGGSFYRDHCPVLGEQNGN
RNPGGLQIGDLVNIDLDLEIVQSLQHGHGGWTDGMFETLTTTGTVCGIDEDHDIVVQYPS
GNRWTFNPAVLTKANVVRSGDAAQGAEGGTSQFQVGDLVQVCYDLERIKLLQRGHGEWAE
AMLPTLGKVGRVQQIYSDSDLKVEVCGTSWTYNPAAVSKVASAGSAISNASGERLSQLLK
KLFETQESGDLNEELVKAAANGDVAKVEDLLKRPDVDVNGQCAGHTAMQAASQNGHVDIL
KLLLKQNVDVEAEDKDGDRAVHHAAFGDEGAVIEVLHRGSADLNARNKRRQTPLHIAVNK
GHLQVVKTLLDFGCHPSLQDSEGDTPLHDAISKKRDDILAVLLEAGADVTITNNNGFNAL
HHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGNANLD
IQNVNQQTALHLAVERQHTQIVRLLVRAGAKLDIQDKDGDTPLHEALRHHTLSQLRQLQD
MQDVGKVDTAWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGADLGIRNKKGQSPLDLC
PDPSLCKALAKCHKEKVSGQVGSRSPSMINNDSETLEECMVCSDMKRDTLFGPCGHIATC
SLCSPRVKKCLICKEQVQSRTKIEECVVCSDKKAAVLFQPCGHMCACENCASLMKKCVQC
RAVVERRVPFIMCCGGKGTEDTSDDISSGNIPVLQKDKDNTNVNADVQKLQQQLQDIKEQ
TMCPVCLDRLKNMIFLCGHGTCQLCGDRMSECPICRKAIERRILLY
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctcgcggaacaaccgggtgatggtggaaggagtcggggcccgggtggtccgc
ggcccggactggaagtgggggaagcaggatggcggcgagggccatgtgggtaccgtacgc
agcttcgagagccccgaggaggtggtcgtggtgtgggacaacggcaccgccgccaactac
cgctgctccggggcctacgacctccgcatcctcgacagcgcgcccaccggtatcaagcat
gatgggactatgtgcgatacttgtcgacagcagcctatcattggcatccgatggaaatgt
gctgaatgcacgaattatgacttgtgcacagtttgctatcacggggacaagcatcacttg
aggcatcgtttttacagaattactacaccaggaagtgaaagggtattgttggagtctcga
cgtaaatcaaagaaaattacagcaagaggaatctttgcaggtgccagggtggtgcgagga
gttgactggcaatgggaagatcaagatggtggcaatgggcgtagaggaaaggtgactgaa
atccaagattggagtgcgtcgagtccacatagtgcagcatatgttctttgggacaatggt
gctaaaaacctttacagagttggctttgagggcatgtctgacctgaaatgtgttcaagat
gcaaaaggaggctctttctacagagaccattgtcctgtgctaggtgagcaaaatggtaac
agaaaccctggtggactgcaaataggtgaccttgtaaacattgacctcgacttggaaatt
gtgcaatctttgcagcatggccatggaggatggactgatggcatgtttgaaactttaaca
acaaccggaacagtttgtggcatcgatgaggaccatgacattgtagtacaatatccaagt
ggcaacaggtggacatttaatccagctgttctcaccaaggccaacgttgtccgaagtgga
gatgctgctcaaggtgcagaaggaggtacctctcaattccaagtgggtgaccttgttcaa
gtatgttacgacctggagcgaatcaagcttctccagagaggccatggagagtgggctgag
gcaatgcttccaactttaggtaaagttggtcgggttcagcagatctattcagacagtgac
ttaaaggtagaggtttgtgggacatcttggacctataatccagcagctgtctcaaaggtg
gcatcagcaggatctgctataagtaatgcatctggtgagagattgtcccagctattgaaa
aaattatttgaaacccaagaatctggagatctcaatgaagagttggttaaagctgctgcc
aatggagacgttgctaaagtggaagacctgctaaagaggccagatgtagatgtgaatggg
caatgtgctggacacacagctatgcaagctgcaagccagaatggccatgtcgacattttg
aagttgcttctgaaacagaacgtggatgtagaagcagaggacaaggatggagacagggct
gtccatcatgcagcgttcggtgacgagggtgctgtgatcgaggttttgcaccgaggcagc
gcagatttgaacgctcgcaacaagcgcaggcagactccgctccatattgcagtcaacaaa
ggtcacctgcaggttgtcaagactttactggactttggctgccatcccagtctccaggat
tctgaaggagacactccacttcatgatgcaataagtaaaaagcgtgatgatatccttgct
gtactgttagaagctggagcagatgttactatcaccaacaacaatgggtttaatgctctt
caccacgctgcactgagaggaaaccctagtgcaatgcgtgtgttgttgtccaagttacca
cgaccgtggattgttgacgagaaaaaggatgatggttacactgccttacatctggcagct
ctcaataatcatgtggaagtggctgaacttttggtgcatcagggcaatgctaacctggat
atccagaatgttaaccagcaaactgctctgcatcttgctgttgaacgacagcatacacaa
attgttaggctcctggtccgtgcaggtgctaaattggatattcaggataaagatggggat
actcccctgcatgaagccctgagacaccacaccctgtcacagctccgccagctccaagac
atgcaagatgtgggcaaggtagatactgcttgggagccatcaaagaacacattaataatg
ggacttggcactcaaggagcagagaagaagagtgctgcatctattgcctgcttcctggca
gccaacggggctgaccttggcattcgtaacaagaagggtcagtcccctctcgacctctgc
cctgatccgagtctctgcaaagccttggctaaatgtcacaaagaaaaagtcagtggccag
gttggttcccgaagtccgtctatgatcaacaatgattctgaaaccttagaagagtgtatg
gtgtgctcagacatgaagagagatactctgtttggcccttgtggccacattgccacgtgt
tctttgtgctcaccccgggtgaaaaaatgcctcatctgtaaagaacaagttcagtctagg
acaaagattgaagaatgcgtagtgtgttcagacaaaaaggcagcagtgctcttccagcct
tgtggtcatatgtgtgcctgtgagaattgtgcaagcttgatgaagaaatgtgtacagtgt
cgggcagtggttgagcgaagagtgcctttcataatgtgctgcggagggaaaggtacagaa
gataccagtgatgatatttcaagtggaaacattccagttttgcagaaagacaaagacaac
actaatgtcaatgcagatgtacagaagctgcagcaacagttgcaagacatcaaggaacag
actatgtgtcctgtctgtctggaccgcctgaagaacatgatctttctgtgtggccatgga
acgtgtcagctttgtggagaccgaatgagcgagtgccccatatgccgcaaggcaatcgaa
cggaggatccttttgtattaa
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