Corvus cornix (hooded crow): 104689143
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Entry
104689143 CDS
T03546
Symbol
OPN3
Name
(RefSeq) opsin-3
KO
K04256
c-opsin
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccw01009
]
104689143 (OPN3)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ccw04030
]
104689143 (OPN3)
Protein phosphatases and associated proteins [BR:
ccw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
104689143 (OPN3)
G protein-coupled receptors [BR:
ccw04030
]
Rhodopsin family
Vision
Opsin
104689143 (OPN3)
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
104689143
NCBI-ProteinID:
XP_039424068
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Position
3:complement(46896617..46915160)
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AA seq
414 aa
AA seq
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MGLGAGPGGLAPLWPGAMPAGNGTGTSSRLEPAAPEQEVPGERPLFSAGTYELLALLVAT
IGMLGLCNNLLVLVLYYKFKRLRTPTNLFLVNISLSDLLVSVFGVSLTFMSCLRSRWVWD
AAGCVWDGFSSSLFGIVSIMTLTALAYERYIRVVHAKVIDFSWSWRAITYIWLYSLAWTG
APLLGWNRYTLEIHGLGCSVDWKSKDPYDTSFVLLFFLGCLVAPVGIMAYCYGHILHAVR
MLRCVEDFQTVQVIKLLKYEKKVAKMCFLMISTFLICWMPYAVVSLLITYGYSNLVTPTV
AIIPSFFAKSSTAYNPVIYIFMSRKFRHCLLQLLCFRLMRFQRTMKETPATGSDKPIRPI
VMSQKAGDRPKKKVTFSSSSVIFIITSDDTEQIEDSSKHNETKVNVIQVKPLQG
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggggctgggagcggggccgggaggcttagccccgctctggccgggagccatgcccgcg
gggaacggcacgggcacctccagccgcctggagcccgcggcgcccgagcaggaggtgccg
ggcgagcggcccctcttcagcgccggcacctacgagctgctggcgctgctggtcgccacc
atcggcatgctgggcttgtgcaacaacttgctagtgctggtgctctactataagttcaag
cggctccgcacgcccaccaacctcttcctcgtcaacatcagtctcagcgacctgctggtg
tcggtcttcggcgtgagccttaccttcatgtcctgcctgaggagccgctgggtgtgggat
gcggccggctgcgtctgggacggcttcagcagcagccttttcggaattgtttcaattatg
actctcactgctcttgcctatgaacgctacattcgagtggtccatgcgaaggtgattgac
ttctcttggtcttggcgggctatcacatacatctggctgtactcactagcctggactgga
gcgcctcttttgggctggaacagatacacactggaaattcatggattaggttgttcggtg
gactggaagtcaaaagacccttatgatacctcctttgtgctcctttttttccttggctgt
ctagtagcacctgttgggatcatggcctattgctatggtcatattctgcatgcagtaaga
atgcttcgctgtgtagaagatttccagacggttcaagtcatcaagcttctaaaatatgag
aagaaggtggctaaaatgtgtttcttgatgatctccacgttccttatttgttggatgccc
tatgcagtggtctccctcttgataacgtatggctatagcaaccttgtaactccaacagta
gctatcatcccatctttctttgccaagtcaagcactgcttataatccagttatctatatc
ttcatgagtagaaagtttcgacactgccttttgcaactcctgtgctttcgcctgatgaga
ttccagaggacaatgaaagagacaccagcaacagggagtgacaaaccaatacgaccaata
gttatgtctcagaaagcaggggacaggccaaagaagaaagtgactttcagctcttcctct
gtcatttttattatcaccagtgatgacactgagcaaatagaagacagcagtaaacacaat
gagacaaaagtaaatgtcatccaagtaaagccactgcagggatga
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