KEGG   Corvus cornix (hooded crow): 104690005Help
Entry
104690005         CDS       T03546                                 

Gene name
RB1
Definition
(RefSeq) retinoblastoma-associated protein
  KO
K06618  retinoblastoma-associated protein
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw04110  Cell cycle
ccw04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    104690005 (RB1)
   04218 Cellular senescence
    104690005 (RB1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ccw01009]
    104690005 (RB1)
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ccw03000]
    104690005 (RB1)
Protein phosphatases and associated proteins [BR:ccw01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     104690005 (RB1)
Transcription factors [BR:ccw03000]
 Eukaryotic type
  Other transcription factors
   Pocket domain Rb
    104690005 (RB1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Rb_C RB_A RB_B DUF3452 DUF1955
Motif
Other DBs
NCBI-GeneID: 104690005
NCBI-ProteinID: XP_010398784
LinkDB All DBs
Position
Unknown
AA seq 896 aa AA seqDB search
MCDAFPRLEVGEADFVVLCDALKVSDSVREKAWKTYESLSAADGALACNKKKKETWGVCI
FIVAIDLDEVTFTFTELLKSINISVCTFFQFLKEVDVNMDTVSTKVDSTVSRLKKKYDVL
FALYRKFERTCGLIYLEQPSSEISAELSSVLVLKNYWITFLLAKGKVLQVEDDLVISFQL
LLCVLDYFIKLSPPAMLKEPYKSSVSAVTVNGSARTPRRGQNRSSRTAKQLDTDTKIIEI
LCKEHDCNLDEVKNVYFTSFIPFLNSAGIVASNGLPEVEVILKQYDELYLKNKDIDARLF
LTHDETLQPAVIACSQLERTPLKNNSDEEVNIMLPQTPVRAAMNNIQQLIMILNSATDKP
SDTLIMYFNNCTVNPKDSILKRVESFDHIFKKKFAEAVGQGWAEIGSQRYKLGVRLYYRV
MESMLKSEEERLSVQNFSKLLNDNIFHTSLLACAVEVVMATYGRNASQSDSTSAETDLSF
PWILNVFDLKAFDFYKVIESFIRAEPSLTREMIKHLEHCEHRIMESLAWQSGSPLFDLIK
QSKEREGQADQPEPTSTLNMPLQHNHTAADLYLSPVKSPKKKASGPPLSAASTPDVQPAV
IPQTQKPQKSTSLSLFYKKVYLLAYRRLHTLFLHLLSEHPDLEPLIWTLFQHTLQNEYEL
MRDRHLDQIMMCSMYGICKVKNVDLRFKIIVSAYKELCNTNQETFKRVLIREEQYDSIIV
FYNLVFMQKLKTNILQYASSRPPTLSPIPHIPRSPYQFSNSPRRVPAGNNIYISPLKSPY
KFSDGFQSPTKMTPRSRILVSIGESFGTSEKFQKINQMLCNSECQLKRSAEVGAAAPKPL
KRLRFDIEGQDEADGSKHLPQESKFQQKLAEMTSTRTRMQKQKLNDGNDTSASEEK
NT seq 2691 nt NT seq  +upstreamnt  +downstreamnt
atgtgtgatgcttttcctaggctcgaggtcggcgaagcggacttcgtcgtgctctgtgat
gcgctgaaggtgtcggacagcgtgagggagaaagcgtggaagacgtacgagagcttgtcg
gcagcggatggagctctagcttgtaacaaaaagaaaaaggaaacatggggagtatgtatc
tttattgtagcaattgatctggatgaagtgacatttactttcactgagcttttgaaaagt
ataaacataagtgtatgcacattttttcagtttctgaaagaggtggatgttaacatggat
actgtaagcactaaagttgatagcactgtatcaaggctgaaaaagaaatacgatgtatta
tttgcactataccgcaagtttgaaaggacttgtggccttatttatctggaacaacctagt
agtgagatttctgctgaactcagttctgtattagtcctaaaaaattactggattactttt
ttactggcaaaaggtaaagtgttgcaagtggaagatgacctggtgatttctttccagttg
ttgctgtgtgtcttagattattttatcaaactgtcacctcctgctatgctcaaggaacca
tacaagtcttctgtgtctgcagtgactgtaaatggttcagctcgcactccaagaagaggc
cagaacaggagttcgcgtactgcaaagcagcttgatacagatacaaaaattattgaaatc
ctttgtaaagagcatgattgtaatttagatgaggtcaaaaatgtgtatttcacaagcttc
attcctttcttgaattctgctggtattgtagcttcaaatggactaccagaggttgaagtt
atcttgaaacagtatgatgagctctatctcaaaaacaaagatatagacgcaagactattt
ctgacccacgacgaaaccctgcagcctgccgtcatagcatgctcacagttggagaggaca
ccactaaaaaacaattcagatgaggaagtcaatattatgcttccacagactcctgttcga
gcggcaatgaataacattcagcaattgattatgattttaaactcagcaactgataaacca
tcagatactctcatcatgtatttcaataattgcacagtgaaccctaaggatagtatcctg
aaaagagtggaaagttttgaccacatcttcaaaaagaaatttgctgaagcagttggacaa
ggatgggctgaaattggctcacagaggtacaagcttggggtgcgtctgtattacagagta
atggagtccatgctgaagtcggaggaagagcgcctctcagtgcagaatttcagcaaactt
ctgaatgataacatcttccacacatctcttctggcgtgtgctgttgaggttgtcatggct
acgtatggcagaaatgcttcacaaagtgacagtaccagtgctgaaacagacttgtctttc
ccatggattctcaatgtatttgatttaaaagcttttgacttctacaaggtgatcgaaagc
tttattagagcggagcccagcctaacacgggaaatgataaagcatctagaacactgtgaa
catcgaattatggagtctctcgcttggcagtcggggtcgcctctgtttgatcttatcaag
cagtcaaaagagcgagaaggtcaagctgatcagcctgaacccacttctactctcaatatg
cctctccagcataaccacactgctgcagacctctatctttctcctgtgaaatctcctaag
aagaaagcatctggacctcctctaagtgctgcttccactccagatgttcagcctgctgtg
atcccccaaacacagaaaccacagaaatctacctccctctctctgttctacaagaaagtg
tatctactggcctatcgtcgactccacaccctgttccttcaccttctctccgaacatcct
gacctggaacccttaatctggaccctcttccagcacaccctgcaaaatgagtatgagcta
atgagagacaggcacctggaccagatcatgatgtgttccatgtatggcatatgcaaagtg
aagaatgtagatcttcgatttaaaataatagtttcagcatacaaggagctttgcaacaca
aatcaagagactttcaaacgtgttcttatccgtgaagaacagtatgactccatcatagtc
ttttacaacttagtgtttatgcagaagctgaaaacaaacattttgcagtatgcttccagc
aggcctcccactctgtcacctatcccacatattcctcgcagtccttaccagttttccaac
tctcctcggcgtgttcctgctggcaataacatctacatctcacctctgaagagcccatac
aaattctctgatgggtttcagtcacccacaaagatgactccaaggtctagaattttggtg
tcaattggagaatcatttgggacttctgaaaagtttcaaaaaataaaccagatgttgtgc
aacagtgagtgccagctgaagcgcagtgcagaagtaggtgctgctgccccgaagccactg
aagaggctgcgctttgatatagaggggcaagatgaggcagatggaagcaaacacctaccc
caggagtccaagttccaacaaaagcttgcagaaatgacatctactcgaacaagaatgcaa
aagcagaagctcaatgatggaaatgatacctcagccagtgaagaaaagtga

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