Corvus cornix (hooded crow): 104695752
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Entry
104695752 CDS
T03546
Symbol
SLC6A1
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccw02000
]
104695752 (SLC6A1)
Transporters [BR:
ccw02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
104695752 (SLC6A1)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
104695752
NCBI-ProteinID:
XP_010408049
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Position
12:complement(2422065..2465940)
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AA seq
598 aa
AA seq
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MATNGTKVADGQISTEVDASITNDKPKTLVVKVQKKKTDLPDRDTWKGKFDFLMSCVGYA
IGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLGVWKLAPM
FKGVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTTLPWKHCENPWNTDRCFSNYTLAN
TTNMTSAVVEFWERNMHQMTDGLEKPGQIRWPLAITLAIAWILVYFCIWKGVGWTGKVVY
FSATYPYVMLLILFFRGVTLPGAKEGILFYITPNFSKLSDSEVWLDAATQIFFSYGLGLG
SLIALGSYNPFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMANVTKRPIADVAASGP
GLAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEFPKLLRNRRE
IFIALVCIVSYVIGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECISISWCYGVNRFY
DNIQEMVGYRPCIWWKLCWSFFTPIIVAGVFIFSAVQMTPLTMGSYVFPKWGQGVGWFMA
LSSMVLIPGYMAYMFLTLKGSLKQRIQVMIQPSEDITHPENGPDQAQQSNSANKEAYI
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaacggcaccaaagtggcggacggccagatctccaccgaggtcgacgcctcc
atcaccaacgacaagcccaaaaccttggtagtaaaagtgcagaagaagaagacggacctt
ccagaccgagacacgtggaaagggaaatttgactttcttatgtcctgtgtaggttatgcc
attggcttagggaatgtgtggagatttccgtacctgtgtggcaagaacggtggaggtgca
ttcctgattccctattttctaactttaatttttgctggagttccactgttccttttggag
tgttcccttggtcagtatacatctataggaggccttggagtgtggaagcttgctccaatg
ttcaaaggtgtgggactggctgctgcagtcctgtccttttggctaaatatttactacatt
gtgattatttcgtgggccatatactacctgtataattcctttaccactaccctcccttgg
aaacactgtgagaacccctggaacaccgaccgctgcttctccaactacaccttagcaaac
accaccaacatgacaagtgccgtggtggaattctgggaacgcaacatgcaccaaatgacc
gacggcttggaaaagccggggcaaatccgatggccactggcaatcaccctggcaattgcc
tggattctggtgtatttttgtatctggaagggggtaggctggactggaaaggtggtatat
ttctctgctacttatccctatgttatgctgcttatcttgttcttccgtggtgtaacactg
cctggagcaaaggaaggcattttattctatataactcccaacttcagtaagctttcagac
tctgaggtttggctggatgctgccacacagattttcttctcctacggtttgggtcttggt
tcactgattgcccttggaagttacaaccctttccacaataatgtttacagggactccatc
atagtgtgctgcataaactcatgcacgagcatgtttgctggctttgtcatcttctccatt
gtgggattcatggctaatgtcacaaagaggcctattgcagatgttgcagcatcaggtcct
ggactggcatttctggcgtacccagaagcggtgacacagttgcccatctcccctttgtgg
gcaatactcttcttctccatgctgctcatgctgggcattgacagtcagttctgcaccgtg
gaaggcttcatcacagccctggtggacgagttccccaagctgctgcgcaaccgccgggag
atcttcatcgcgctcgtgtgcatcgtgtcctacgtgatagggctgtccaacatcactcag
ggtggaatctatgtgtttaagctttttgactactactctgccagcggaatgagtctcttg
ttcctcgtattctttgagtgcatctcgatatcctggtgctatggtgttaatagattttat
gacaacatccaagagatggtgggatacagaccctgcatctggtggaaactctgctggtcc
tttttcactcctatcattgtggcaggagtgttcatcttcagtgctgtgcagatgaccccg
ctgacgatggggagttacgtgttcccaaaatggggccagggggttggctggttcatggcc
ctgtcctctatggtgctgataccaggctacatggcatacatgttcctaaccctgaaaggc
tccctaaagcagcgcatccaagtgatgattcagccaagtgaagacatcacccaccctgag
aatgggccagaccaggcccaacagagcaactccgccaacaaagaagcctacatctaa
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