KEGG   Corvus cornix (hooded crow): 104695776Help
Entry
104695776         CDS       T03546                                 

Gene name
WBSCR17
Definition
(RefSeq) putative polypeptide N-acetylgalactosaminyltransferase-like protein 3
  KO
K00710  polypeptide N-acetylgalactosaminyltransferase [EC:2.4.1.41]
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw00512  Mucin type O-glycan biosynthesis
ccw01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00512 Mucin type O-glycan biosynthesis
    104695776 (WBSCR17)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:ccw01003]
    104695776 (WBSCR17)
Enzymes [BR:ccw01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.41  polypeptide N-acetylgalactosaminyltransferase
     104695776 (WBSCR17)
Glycosyltransferases [BR:ccw01003]
 O-Glycan biosynthesis
  Mucin-type
   104695776 (WBSCR17)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Glycos_transf_2 Ricin_B_lectin Glyco_tranf_2_3 RicinB_lectin_2 Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID: 104695776
NCBI-ProteinID: XP_010408081
LinkDB All DBs
Position
Unknown
AA seq 598 aa AA seqDB search
MASLRRVKVLLVLNLIAVAGFVLFLAKCRPITTKSSDSFHDIHPRAEVANLTAHGISSIQ
DAVLKRLSLLEDIVYRQLNGLSKSLGLIEGYGGRGKGGLPATLSPEEEEKAKGPHEKYGY
NSYLSEKISLDRSIPDYRPTKCKELKYGKDLPQISIIFIFVNEALSVILRSVHSAVNHTP
APLLKEIILVDDNSDEEELKAPLEEYVNKRYPGLVKVVRNQKREGLIRARIEGWKAATGQ
VTGFFDAHVEFTAGWAEPVLSRIQENRKRVILPSIDNIKQDNFEVQRYENSAHGYSWELW
CMYISPPKDWWDAGDPSLPIRTPAMIGCSFVVNRKFFGEIGLLDPGMDVYGGENIELGIK
VWLCGGSMEVLPCSRVAHIERKKKPYNNNIGFYTKRNALRVAEVWMDDYKWHVYIAWNLP
LENPGIDIGDVSERKALRKSLKCKNFQWYLDHVYPEMRRYNNTIAYGELRNNKAKDVCLD
QGPQENHTAILYPCHGWGPQLARYTREGFLHLGALGTTTLLPDTRCLVDNGKSRFPQLLD
CDKVKSSLHKRWNFIQNGAILNKGTGRCLEVENRGMAGIDLILRSCTGQRWTIKNFIK
NT seq 1797 nt NT seq  +upstreamnt  +downstreamnt
atggcttctttgaggagagtcaaagtcctgctggtgttaaacctgatcgccgtggctggc
ttcgtcctcttcctggccaagtgcagacccatcacgaccaagagcagcgactccttccat
gacatccatcccagggcagaagtggccaacttgacagcccacggcatcagctccatccag
gatgcagtgctgaagaggctctcgctcctagaagacattgtctacaggcagctgaatggt
ctgtccaagtcccttggcctcattgagggctatggtggccgtggcaagggtggcctccca
gccaccctgtcccctgaggaggaggagaaagcaaagggaccccatgagaagtatggctac
aactcctacctcagcgagaagatttctctggaccgttccatcccggattatcgcccaacc
aagtgcaaagagctgaaatacgggaaggaccttccgcagatctccatcatcttcatcttc
gtgaacgaggcgctgtcggtgatcctgcgctcggtgcacagcgccgtcaaccacacgccg
gcacccctgctcaaggagatcatcctggtggatgacaacagcgatgaggaggagctgaag
gcgccgctggaggaatacgtcaacaagcgctacccggggctggtgaaggtcgtgaggaac
cagaagagggaagggctgatccgagcccgcatcgagggttggaaagcggccacgggccag
gtcaccggcttcttcgatgcccacgtggagttcactgctggctgggccgagccggtgctg
tcccggatccaggagaacaggaagagggtgatcctgccctccatagacaacatcaagcag
gacaacttcgaggtgcagcgctacgagaactctgctcacggctacagctgggagctgtgg
tgcatgtacatcagcccccccaaggactggtgggatgccggggacccctcactgcccatc
aggaccccggccatgatcggctgctcgttcgtggtgaacaggaaattcttcggggagatc
gggctgctggaccccggcatggacgtgtacggaggggagaacatcgagctgggcatcaag
gtgtggctgtgtgggggcagcatggaggtgctgccctgctccagggtggcccacatcgag
cgcaagaagaagccctacaacaacaacatcggcttctacaccaagcgcaacgcgctgcgc
gtggccgaggtctggatggacgactacaagtggcacgtctacatcgcctggaacctgccc
ctggagaacccaggcattgacattggggatgtttctgagagaaaagccttgaggaagagc
ctgaagtgtaaaaacttccagtggtacctggaccatgtttatccagaaatgaggagatac
aacaacaccattgcttatggagagctccggaacaacaaggccaaggacgtgtgcctggac
cagggcccgcaggagaaccacacagcaatactgtacccctgccatggctggggcccacag
ctggctcgatacaccagggaggggttcctgcacctgggggccctgggcaccaccacgctg
ctgcccgacacgcgctgcctggtggacaacggcaagagccgcttcccgcagctgctggac
tgcgacaaggtcaagagcagcctccacaagcgctggaatttcatccagaacggggccatc
ctgaacaagggcacgggccgctgcctggaggtggagaacaggggcatggctggcattgac
ctgatccttcgcagctgcacggggcagaggtggacaattaaaaacttcatcaagtag

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