Corallococcus coralloides: COCOR_01842
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Entry
COCOR_01842 CDS
T01780
Symbol
fecI
Name
(GenBank) ECF subfamily RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
ccx
Corallococcus coralloides
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccx03021
]
COCOR_01842 (fecI)
Transcription machinery [BR:
ccx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
COCOR_01842 (fecI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
SnoaL_2
DUF4440
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
AFE08773
UniProt:
H8MEV3
LinkDB
All DBs
Position
2206085..2206999
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AA seq
304 aa
AA seq
DB search
MTAPPDAARAPPGSEDLFVTQRSLLFTIAYEMLGSAADAEDVVQETWLRWADMGDAGRAE
VRDPRSYLVRMVTRQALNRLRTLTRRKEDYVGEWLPEPLLTSPDVAEDLALAESVSIAML
TVLETLTPAERVVFVLREVFDMPYDEIAPALDKTPAAVRQIAHRAREHVAARRPRMQVGR
AEQEAVLERFLAAVNSGDLKCLLDVLAPDVVLVADGGGVVTAVRRPIVGVEHVARLLSRF
PTLAPDARISTAWINGAPSLRVDIAGNLDTAISVVVESGRIARIYAMRNPHKMGRLGEQV
KLSR
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgacggccccgcccgatgcggcccgcgctccgccaggctcggaggacctcttcgtcacc
cagcgcagcctgctcttcacgatcgcgtacgagatgctcggctccgcggccgacgcggag
gacgtcgtgcaggagacctggctgcggtgggcggacatgggggacgcaggccgggcggag
gtgcgtgacccgcgcagctacctggtccggatggtcacccgtcaggcgctcaacaggctg
cgcacgctcacccgtcgcaaggaggactacgtcggcgaatggctgcccgagccgctgctc
accagccccgacgtcgccgaggacctcgcgctcgcggaaagtgtctccatcgcgatgctc
accgtgctggagaccctcacgccggccgagcgggtggtgttcgtgctccgggaggtcttc
gacatgccgtacgacgagattgctccggcgctcgacaagacgcccgccgccgtccggcag
attgcccaccgggcgcgggagcacgtggccgcgcgtcggccccggatgcaggtcggccgg
gcggagcaggaggcggtcctggagcggttcctggccgcggtcaactccggcgatttgaaa
tgcctgctcgacgtgctcgcccccgacgtggtgctggtcgccgacggcggcggcgtggtg
acggcggtccggcgcccgattgtcggcgtcgagcatgtggcccggctcctgtcccgcttc
cccacgctcgcgcctgacgctcggatctcgaccgcatggatcaacggagcgccctcgctc
cgggtcgacatcgctggcaacctcgacacagcgatcagcgtcgtcgtggagagcggccgg
atcgcccggatctatgccatgcgcaacccgcacaagatgggccggctcggtgagcaggtg
aagctgagccggtag
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