Corallococcus coralloides: COCOR_04536
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Entry
COCOR_04536 CDS
T01780
Symbol
rmlB2
Name
(GenBank) NAD-dependent epimerase/dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ccx
Corallococcus coralloides
Pathway
ccx00521
Streptomycin biosynthesis
ccx00523
Polyketide sugar unit biosynthesis
ccx00525
Acarbose and validamycin biosynthesis
ccx00541
O-Antigen nucleotide sugar biosynthesis
ccx01100
Metabolic pathways
ccx01110
Biosynthesis of secondary metabolites
ccx01250
Biosynthesis of nucleotide sugars
Module
ccx_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
COCOR_04536 (rmlB2)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
COCOR_04536 (rmlB2)
01055 Biosynthesis of vancomycin group antibiotics
COCOR_04536 (rmlB2)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
COCOR_04536 (rmlB2)
00525 Acarbose and validamycin biosynthesis
COCOR_04536 (rmlB2)
Enzymes [BR:
ccx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
COCOR_04536 (rmlB2)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
TrkA_N
adh_short
Motif
Other DBs
NCBI-ProteinID:
AFE10173
UniProt:
H8MGQ9
LinkDB
All DBs
Position
complement(5743671..5744630)
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AA seq
319 aa
AA seq
DB search
MRGKRAVVLGGAGFVGSHLCERLLDDGAESVLAVDNLITGNEANVRTLKPRAGFQFVNQD
ITEGLEVDGPVDFVLNLASPASPIDYANLPIETLRVGSIGTENALKLAEKKKAVFLMAST
SEVYGDPLVHPQKEDYWGNVNPIGPRSVYDEAKRYSEAISAAYERSRGVNVRIVRIFNTY
GPRMRLNDGRVVPAFVGQALKGEDFSVFGDGSQTRSFCYVKDLVDGLVRLVLSDVRGPVN
IGNPREMTIKQFAEAVREAAGGGRQIVYHPLPKDDPKQRQPDITRARTLLGWEPKVKLED
GLRDTIAYFREVAARPSGT
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggcaagcgggcggtggtgctgggtggggccggattcgtgggctcgcacctgtgt
gagcggctgctggacgacggcgcggagtccgtcctcgcggtggacaacctcatcacgggc
aatgaggcgaatgtccgcacgctcaagccgcgcgcgggcttccagttcgtgaaccaggac
atcacggaagggctggaggtggacgggccggtggacttcgtcctcaacctggcctcgccc
gcgtcgcccatcgactacgcgaacctccccatcgaaacgctgcgcgtgggctccattggc
acggagaacgcgctgaagctggcggagaagaagaaggccgtgttcctcatggcctccacg
tcggaagtgtacggcgacccgctggtgcacccccagaaggaggattactggggcaacgtg
aatcccatcgggccccgctcggtgtacgacgaggccaagcgctactcggaggccatcagc
gccgcgtacgagcgcagccggggcgtgaacgtccgcatcgtgcgcatcttcaacacctac
ggcccgcgcatgcgcctcaacgacggccgcgtggtgcccgccttcgtgggccaggcgctc
aagggcgaggacttcagcgtcttcggggacggcagccagacgcgctcgttctgctacgtg
aaggacctggtggacggcctggtgcggctggtgctgtcggacgtccggggcccggtgaac
atcggcaacccgcgcgagatgaccatcaagcagttcgcggaggccgtgcgcgaggcggcc
ggtggaggtaggcagatcgtctaccacccgctgcccaaggatgatccgaagcagcgtcag
ccggacatcacgcgcgcgcgcacgctgctgggttgggagcccaaggtgaagctggaggat
ggtttgcgggacaccatcgcctacttccgagaggttgccgctcgcccctctgggacttag
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