Campylobacter coli RM4661: YSS_07785
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Entry
YSS_07785 CDS
T03166
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ccy
Campylobacter coli RM4661
Brite
KEGG Orthology (KO) [BR:
ccy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccy03016
]
YSS_07785
Enzymes [BR:
ccy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
YSS_07785
Transfer RNA biogenesis [BR:
ccy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
YSS_07785
Prokaryotic type
YSS_07785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AHK77388
LinkDB
All DBs
Position
complement(1478515..1479633)
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AA seq
372 aa
AA seq
DB search
MNLEEENTIFKPLYSLKHSPINAYFSKNSDDFVVRERPLYELSGKGEHLILHINKKDLST
NEALKILSEASGVKMRDFGYAGLKDKQGSTFQYLSMPKKFESFLANFSHPKLKILETFIH
ENKLRIGHLKGNSFFIRLKKVMPSDALKLEQALMNLDKQGFANYFGYQRFGKFGDNYKEG
LEILRGKKMKNVKMKEFLISAFQSELFNRYLSKRVELSHFANDFTEKELAQIYSISKEEA
KELKKQEQFFKLLKGEVLGHYPFGKCFLCEDLSAELERFKARDISAMGLLIGAKAYEASQ
GLALNLENEIFKDALEFKAKMQGSRRFMWSYLEDVKWRYDEQKAHFCMEFFLQKGSYATV
VLEEILHKNLFE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagaggaagagaacaccatttttaagcctttgtatagtttaaaacacagtcct
attaatgcgtattttagtaaaaatagtgatgattttgtagtgcgtgaaaggcctttgtat
gaattgagtggcaagggcgaacatcttatcttgcatatcaataaaaaagatttaagcact
aatgaagctttaaaaattttaagtgaagcaagcggggttaagatgcgtgattttggctat
gctggacttaaagacaagcaaggctctacttttcaatatctttctatgcctaaaaaattc
gagagttttttggctaatttttctcatcctaagcttaaaattttagaaacttttattcac
gaaaataaattaagaataggccatttaaaaggaaattctttttttatacgcttaaaaaaa
gtaatgccaagcgatgctttaaaactagaacaagctttgatgaatttggataaacagggg
tttgcaaattattttggttatcaacgctttggaaaatttggggacaattacaaagaaggg
cttgaaattttacgtggtaaaaagatgaaaaatgtcaaaatgaaggagtttttaatctct
gcttttcaaagcgagctttttaatcgttatttgagtaaaagagtggaattatcgcatttt
gcaaatgattttaccgaaaaagaattggcacaaatttatagcatctccaaagaagaagct
aaagaacttaaaaaacaagagcagttttttaagcttttaaaaggcgaggttttggggcat
tatccttttggaaaatgctttttatgcgaggatttaagtgctgaacttgaacgttttaag
gcaagagatatcagtgctatgggacttttaatcggtgctaaagcttatgaggctagtcaa
ggactggctttaaatttggaaaatgaaatttttaaagacgctttggaatttaaagctaaa
atgcaaggctcaagacgctttatgtggtcgtatttagaagatgttaaatggcgttatgat
gagcaaaaagcccatttttgcatggagtttttcttgcaaaaaggctcttacgctactgta
gttttagaagaaattttgcataaaaatttgtttgaatga
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