Capnocytophaga cynodegmi: CGC48_06260
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Entry
CGC48_06260 CDS
T05499
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
ccyn
Capnocytophaga cynodegmi
Pathway
ccyn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CGC48_06260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccyn03400
]
CGC48_06260
DNA repair and recombination proteins [BR:
ccyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CGC48_06260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
ATPase_2
AAA_14
AAA_29
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ATA68266
UniProt:
A0A250E980
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Position
1423631..1426228
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AA seq
865 aa
AA seq
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MAKQTKKETPLMKQYNQIKAKYPDALLLFRVGDFYETFGEDAVKAAQVLDIVLTNRNNGS
ERTELAGFPHHSINNYLPKLVKAGYRVAICDQLEDPKTVKGIVKRGVTELVTPGVALNDD
ILHSKSNNFLASVWFAKNINGVSFLDISTGEFLVAQGDKANIDKLLQNFKPSEILVAKKQ
KKEFTESFGDDFHLFFLEDWVYKEDYARQILTQHFQTNSLKGFGVEELTESLLAAGSILY
YLSETQHNKLQHITSIQWIVEDAYVWLDKFTIRNLELYTGTSSQSVTLLDVIDKTISAMG
SRTLKRWLALPLKDIAKIKQRHEVVSHFMGHIDALQKIKEHISKISDIERLISKVATGKI
TPREVVQLKNSLEMIPPIKEICNQAKNHDLNVLADKLHSCEELCDQIAVTLNEEAPVNIL
KGNAIKEGVSAELDELRKLSVSGKAYLDEMLKRETEKTGISSLKIDYNNVHGYYIEVRNT
HKDKVPQDWIRKQTLVNAERYITEELKTYEAKILGAEEKIAQLEQAIFAELIISIGNYIA
QVQQNATLIGQLDCLCGFASLALENNYNRPEMDESFILDIKDGRHPVIEKQLPVGVPYIA
NDVYLDRDSQQIIMITGPNMSGKSAILRQTALIVLLAQIGSFVPADSARIGIVNKIFTRV
GASDNISMGESTFMVEMNEAALILNNISERSLVLLDEIGRGTSTYDGISIAWAIAEYLHE
HPSKAKTLFATHYHELNEMTDGFERIKNFNVSVKETKDNVLFIRKLVSGGSAHSFGIHVA
KMAGMPQFVIQKANKMLKKLESSHASEDTSQKLKSAQKEMQLSFFNMDDPLLEEIKSEIL
QLDINTLTPVEALMKLNELQRMIQK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaagcagactaagaaagaaactcccttaatgaagcaatacaatcagattaaagca
aaatatcctgatgcgttgttgcttttcagggtgggggatttttatgaaacgtttggtgag
gacgctgtaaaggctgcccaagtgcttgatattgtgcttaccaaccgaaataatggtagc
gaacgcacggaacttgctggttttccgcatcattcaataaacaactatttgccaaaatta
gtcaaggcgggttatagggttgcaatttgtgaccaacttgaagaccctaagactgttaaa
ggcatcgtgaaacgcggtgttactgagctggttacccctggtgtagctttaaacgatgat
attcttcattcaaaatcgaacaactttttggcttccgtatggtttgcaaaaaatataaac
ggagtcagttttctggatatttccacaggcgaatttttggtagcacaaggagataaagct
aacattgataagctattacaaaacttcaagccgagcgaaattctggtggcgaaaaagcaa
aaaaaagagtttacagaaagttttggtgatgattttcatcttttctttttagaagattgg
gtgtacaaggaggattacgctcgtcaaattctaacgcaacattttcaaaccaattcttta
aaaggatttggcgtagaggaacttacagaatctttattagctgcgggttctattctttat
tatctatctgaaacacaacataataaattacaacatattacttccattcagtggattgtg
gaagatgcttacgtatggttggataagttcactattcgcaatttggagctttatacagga
acttccagccaatcggtaacccttttggacgtcattgacaaaacgatttctgcaatgggt
agccgaaccttaaaacgctggttagcacttccgttgaaggatatcgccaaaataaagcaa
cgtcacgaggtggtttcgcactttatggggcatattgatgcgttgcaaaagattaaagaa
catatttcaaaaataagtgatattgagcgacttatttcaaaagttgcgacagggaagatt
acgcctcgtgaggtcgttcagctgaaaaattcactggaaatgattcctccgataaaagaa
atatgcaatcaagctaaaaatcacgatttgaatgttttagccgataaattgcattcgtgt
gaagagctttgtgatcagattgccgtaacgcttaatgaggaagctccggtcaatattctg
aaagggaatgccataaaagaaggagtttctgcggaattggacgaacttcgcaaactttct
gtttcagggaaagcctatttggacgagatgctcaaaagagagaccgaaaaaactggaatt
tcttctttaaaaatcgattataacaatgttcacggatattatattgaggttcgtaacacg
cacaaagacaaggttccgcaagattggattcgtaaacaaaccctcgttaatgccgaaaga
tacatcacggaggaattaaaaacttacgaagctaaaattttaggagcagaagagaaaata
gcacaacttgaacaagctatttttgccgaattgattatttcgataggaaattatattgct
caggtacagcaaaatgcaacgcttattggtcagttggattgcctctgcggatttgcctca
cttgctcttgaaaataattacaatcgccctgaaatggacgagtcattcattttagatatc
aaagatggaaggcatccagtcattgaaaaacaattgcctgtgggcgttccttatatcgcc
aatgatgtatatcttgaccgtgattcacagcaaattataatgattacaggacccaatatg
tcaggtaaatctgcgattttgcgtcagactgcactcattgttttgttggcacagattgga
agttttgttccggctgattcagcacgaataggtattgtgaataagatttttacgcgtgtt
ggggctagtgataatatttcaatgggagaatcaacttttatggttgaaatgaacgaagca
gccctgattttgaataatatatcagaacgaagtttagttttacttgatgagataggcaga
ggaacaagtacttacgacgggatttctatcgcttgggcaatagctgaatatttgcacgaa
catccatcgaaggcaaaaaccttatttgcaacacattatcacgaacttaatgaaatgact
gatggtttcgagcggattaaaaacttcaacgtttcagtcaaagaaactaaggataatgta
ttgtttatccgaaagttagtttctggtgggtctgctcatagctttggtattcacgtagca
aaaatggcaggaatgcctcaatttgttattcagaaggccaataaaatgctcaaaaaactg
gaaagttcacacgcttcggaagatacttcacaaaagttaaaatcagctcaaaaagaaatg
caacttagctttttcaatatggacgacccacttctggaagaaataaagtcagagattttg
cagttggatatcaatacattaactcccgttgaggcactgatgaaacttaatgaacttcaa
cggatgattcagaaataa
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