Capnocytophaga cynodegmi: CGC48_07565
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Entry
CGC48_07565 CDS
T05499
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ccyn
Capnocytophaga cynodegmi
Pathway
ccyn00521
Streptomycin biosynthesis
ccyn00523
Polyketide sugar unit biosynthesis
ccyn00525
Acarbose and validamycin biosynthesis
ccyn00541
O-Antigen nucleotide sugar biosynthesis
ccyn01100
Metabolic pathways
ccyn01110
Biosynthesis of secondary metabolites
ccyn01250
Biosynthesis of nucleotide sugars
Module
ccyn_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccyn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CGC48_07565 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CGC48_07565 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CGC48_07565 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CGC48_07565 (rfbB)
00525 Acarbose and validamycin biosynthesis
CGC48_07565 (rfbB)
Enzymes [BR:
ccyn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CGC48_07565 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
adh_short
KR
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
ATA68500
UniProt:
A0A250E682
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Position
complement(1678549..1679607)
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AA seq
352 aa
AA seq
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MKKNILITGGAGFIGSHVVRLFVNKYPDYRIINLDLLTYAGNLENLKDIEKSPNYEFVKA
DICDFQAMKQLIESKNISGIIHLAAESHVDRSIKDPFTFAKTNVMGTLSLLQAAREVWNG
NWDGKLFYHISTDEVYGALQMDNTLFTENTKYDPHSPYSASKASSDHFVRAYQDTYGLPT
VISNCSNNYGSYQFPEKLIPLFINNIRNNKPLPVYGRGENVRDWLYVEDHARAIDVIFHK
GKIGDTYNIGGFNEWKNIDLIRVIIKEVDKQLGRPEGSSEKLITFVTDRAGHDLRYAIDA
TKIKEELGWEPSLQFEEGIQRTVTWYLQNQEWLDTITSGDYQKYYDQMYKNR
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaacattttaataacaggcggagctggatttataggctcgcacgtggttcgg
ttgtttgtaaacaaatatcctgactacagaatcatcaatttggatttactaacgtatgcc
ggaaacttggaaaacctcaaagatatagagaaatcacctaactacgagttcgtaaaggct
gatatctgcgactttcaggctatgaagcaactcatcgagagcaaaaacatcagcggaata
atccatttggcagcagaaagccacgtagaccgcagcattaaagacccttttaccttcgcg
aagaccaatgttatgggtacgctatcactcctacaggcagcacgtgaggtttggaacggc
aattgggacggaaagctgttctaccacatctctaccgatgaggtgtatggtgctttgcag
atggacaacacgctttttacagaaaacacaaagtacgacccacattcgccctattcggca
tcgaaagcctcgtccgaccacttcgttcgagcttatcaagacacctacggacttccgaca
gttatctccaactgctccaataactacggaagctatcagtttcctgaaaaattaatccct
ttattcatcaataacattcggaataataagccattacccgtttacggacgaggtgaaaac
gtgcgagattggctctacgttgaagaccacgccagagcaattgacgtaatattccacaag
ggtaaaattggcgatacgtataacatcggaggctttaacgaatggaaaaacatcgacttg
atacgcgtcatcatcaaagaagtagataagcagctaggtcgccctgaaggaagctcggaa
aaactcattacgtttgttactgaccgagcaggacacgaccttcgttatgctattgacgct
acaaaaattaaggaagagcttggttgggagccttccttgcagttcgaagagggaattcag
cgtaccgtaacttggtatctgcaaaatcaagaatggctagatactatcaccagtggcgac
taccaaaaatattacgaccagatgtataaaaataggtag
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