Chthonomonas calidirosea: CCALI_01318
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Entry
CCALI_01318 CDS
T02699
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ccz
Chthonomonas calidirosea
Pathway
ccz03030
DNA replication
ccz03430
Mismatch repair
ccz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCALI_01318
03430 Mismatch repair
CCALI_01318
03440 Homologous recombination
CCALI_01318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccz03032
]
CCALI_01318
03400 DNA repair and recombination proteins [BR:
ccz03400
]
CCALI_01318
Enzymes [BR:
ccz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CCALI_01318
DNA replication proteins [BR:
ccz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CCALI_01318
DNA repair and recombination proteins [BR:
ccz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CCALI_01318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA_5
Mg_chelatase
AAA_16
RuvB_N
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
CCW35136
UniProt:
S0EXV9
LinkDB
All DBs
Position
complement(1556879..1557985)
Genome browser
AA seq
368 aa
AA seq
DB search
MPRFADLVGQEPAINALRKAITQGRFHGTWLMVGSPGVGRGTLARTLAQVVACQTPQRDP
LDACGVCVSCRYADAGSHPEILTIRPAGEQIQIWQLWDRNGRPPGALSHTLSFAPVIGRK
RVYILEQVERLTEAAANSLLKVLEEPPPYALFILTAPHPSRVLPTIVSRSQVLRLLPLPQ
TALADYLRQRFALEPAQAYQVAAISEGRIGQGIRLASNPQALREIENVFELIEMIAVAPK
GRALRLGEQMRRLAGELKSFFEEEAANSESEEGEPSVQREQAARRQFAALFDLMVIFYRD
LFLLSTCGPEAAIVNVHRRSALAHIAQKASPQRWQHAIAAILLARRRLDFNANIPLLTDT
LLMQLLAD
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtttcgccgatcttgtgggtcaagaaccagctataaacgcgctacgcaaggca
ataacccaagggcgctttcatggtacttggctgatggtgggcagccccggtgtggggcgc
ggcactttggcgcgcacgttggcacaggtggttgcctgccagactcctcaaagagacccg
cttgatgcttgcggcgtctgcgtctcctgtcgctatgccgatgccggctctcaccccgag
atccttacgattcgtccggccggtgagcagattcagatctggcagctttgggatcgcaat
ggacgccctcccggcgctttatcgcatacgctctcctttgccccagttatcgggcgaaag
cgagtctacattttagagcaggtcgagcgacttacggaggccgctgccaacagcctcctc
aaagtgctagaggagccgcctccctacgcactctttatactcaccgcaccccatccatca
cgcgttttgcccactatcgtttcgcgtagtcaggtgctgcggttgcttcccctcccgcaa
accgctctggccgactacctcagacaacgctttgcgctagagccagctcaggcctaccaa
gttgcggcgatatcggagggacgcatcggacaagggatacggctcgcaagcaacccacaa
gcgcttcgggaaatagagaacgtgtttgaactgatcgagatgatcgctgtggcacctaaa
ggacgcgctcttcgactcggcgaacagatgcggcggcttgccggtgagctgaagtccttc
tttgaggaggaggcagccaactcggaatcggaggagggtgagccaagcgttcaacgagag
caggccgcacggcgccagtttgccgctcttttcgatttgatggttatcttctatcgtgat
ctcttcctgttgtccacatgtggcccagaggcggccatcgtaaatgttcatcggcgctct
gctctggcccacatcgcccagaaagcctccccacaacgttggcaacacgccatcgccgcc
attcttttagcccgtcggcgactcgatttcaacgccaacatccccctcctcaccgacacc
ctcctcatgcagctgcttgcagactag
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