Chthonomonas calidirosea: CCALI_01977
Help
Entry
CCALI_01977 CDS
T02699
Name
(GenBank) S-layer homology domain
Organism
ccz
Chthonomonas calidirosea
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLH
Collagen
DUF6627
NPV_P10
MscS_porin
Laminin_II
XhlA
ATG16
Motif
Other DBs
NCBI-ProteinID:
CCW35784
UniProt:
S0EWK0
LinkDB
All DBs
Position
2335130..2337043
Genome browser
AA seq
637 aa
AA seq
DB search
MRKVLPYLGTSLALLAAAWAMPAKAQDQNPFKDVPTDHWAYQAVTDLQQKGIIVGYPDGY
FRGQRTLTRYEFAVALERALQKIQAMPGPPGPQGPPGPQGEQGPPGPPGMTPEEVTELRN
LTHEFQTDLANLGADVKQINQRLDELADQVKAINQRLDKMPKVGGDVFFGVRSNLSRLPF
IDENGTFQPANKSLAEKVYSTHDVHLTVGANLPDNVKLNLDLVSSNYLSSYTSGGLGTTP
GASVNGYPQDTTLYKANLDIPISFLGKNTTLTIGRFGNQVTPLTYYRPNTDYYFDLPWYQ
NGDWIQDGFRLQSKFGSAETQLFAGSFSSLTGTGATPNINTPVIGNVYGIRGFNPITPFY
GLNMLGNTVATQVAGLHIGVPLFKLGEIGVSLIDTSGPVATGPLAFNNVLVYGVNLKLKE
IGKFNVNAEAAKSVRGKNITDTVGYNGDDNAYKLDVSYNTGPLNADVNYLYVDPAFGAPG
YWLRIGNFYNPTNLQGPSARVGYTFSDKLSAYIGGSYFAGARNRVVPGGAGFTTGSFVVV
GKAGVKYSLNKYLDLSADYEGDFYNLSGSVTPLHKPGYPTEQYVTFGVGVHPTTNTTLQL
AYQLLTYRDTGGGLGGALPGGKTSNANVLTIQGNVKF
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaggtattgccctacctaggcacctctctcgcgctgcttgccgccgcctgggcg
atgcccgcaaaggctcaggaccagaatccgtttaaagatgtgccgacggaccactgggcc
tatcaggcggtgaccgacctgcagcagaaggggatcatcgtgggctacccggatggctac
ttccggggtcaacgtacactcacccgctacgagttcgcggtcgctcttgagcgcgcactc
cagaaaattcaggccatgcctggccctcccggcccacaaggccctcccggcccgcaagga
gagcaaggccctcctggccctccaggcatgacgccggaagaggttaccgagcttcgtaac
ctcacccatgagttccaaaccgacttggccaatcttggcgccgacgttaagcagatcaat
cagcgccttgatgagctggccgaccaggtaaaggccatcaatcagcgcctagataagatg
cccaaggtgggtggggacgtcttctttggtgttcgcagcaacctctctcgcttgccgttt
atagacgagaacggcaccttccagcccgccaataagtcgctggctgagaaggtctactcc
acccatgacgtccacctcaccgtcggcgcgaatttgcccgacaacgtgaagctcaacctc
gacctggtaagctccaactacctttctagctataccagcggcggattgggcacaacgcca
ggggcctctgtaaatggctatccgcaggacaccaccctgtataaggccaacttggatatc
ccgatctccttcctcggtaagaataccacccttaccattggacgatttgggaaccaagtg
accccacttacctactaccggcccaacaccgactactacttcgacctgccttggtatcag
aacggggactggattcaggatggtttccgcctgcagtctaagttcggcagcgccgagacc
cagctgttcgcaggtagcttcagctcgctcaccggtaccggtgcgacgccgaacatcaat
acgccggtcatcggaaacgtctacggcatccgcggcttcaaccccattaccccgttctac
ggcttgaatatgctgggcaataccgtggcgacccaggtggccggtttgcacatcggtgtg
ccgctcttcaagctcggtgagatcggcgtgtcgctcatagataccagcggtcccgttgcc
accggcccgctggccttcaacaacgtgttggtctatggcgttaacctgaagctaaaagag
ataggtaagttcaacgtgaacgccgaggccgccaagagcgtgcgcggcaagaacatcacc
gatacggtgggttacaacggtgacgacaacgcctacaagctcgatgtgagctacaacacg
ggcccgttgaacgccgacgtgaactacctgtatgttgacccagccttcggggctccgggc
tactggctgcgcattgggaatttctacaacccaaccaacctccaaggcccaagcgctcgc
gttggctataccttctcggataaactctccgcctatatcggcggtagctacttcgccggg
gcgcgaaaccgtgtggttcccggtggcgctgggttcacaacgggtagcttcgtcgtcgtg
ggtaaggcgggggtgaagtactccctcaacaagtatctcgatcttagcgccgactatgag
ggcgacttctacaacctgtccggctccgtgacaccacttcataaaccgggctatccgacc
gagcagtacgtcacctttggcgtgggggttcatcccaccaccaacaccaccctgcagttg
gcttaccagctgttgacctaccgtgataccggcggtggtctgggtggcgcccttcctggt
ggcaaaacctctaacgccaacgtgctcaccattcagggcaacgtcaagttctaa
DBGET
integrated database retrieval system
