Corynebacterium diphtheriae HC04: CDHC04_0243
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Entry
CDHC04_0243 CDS
T01696
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cda
Corynebacterium diphtheriae HC04
Brite
KEGG Orthology (KO) [BR:
cda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cda03032
]
CDHC04_0243 (topA)
03400 DNA repair and recombination proteins [BR:
cda03400
]
CDHC04_0243 (topA)
Enzymes [BR:
cda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CDHC04_0243 (topA)
DNA replication proteins [BR:
cda03032
]
Prokaryotic type
DNA Topoisomerases
CDHC04_0243 (topA)
DNA repair and recombination proteins [BR:
cda03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CDHC04_0243 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
56B_RHH
Motif
Other DBs
NCBI-ProteinID:
AEX80236
LinkDB
All DBs
Position
249205..252099
Genome browser
AA seq
964 aa
AA seq
DB search
MAAKTGNKRLVIVESATKAKKIAPYLGDDYIVEASVGHIRDLPRGAADVPAKYKKEPWAR
LGVNTDKGFEPLYVVSPDKKKKVADLKAKLKLVDELFLATDPDREGEAIAWHLLEVLKPK
VPVKRMVFNEITKPAILAAAQNTRELDDNLVDAQETRRILDRLYGYEVSPVLWKKVMPRL
SAGRVQSVATRVIVERERERMAFISADYWDVEAEFDTGKPAQDSNPTSFTGRLTALDGKR
VATGRDFNDRGELKGDAVVVDKQRAEALVEELTGVAMSVTKVEEKPYTRRPYAPFMTSTL
QQEAGRKLHYTSERTMRIAQRLYENGHITYMRTDSTTLSEQGLKAAREQAISLYGADYVA
DTPRRYDRKVKNSQEAHEAIRPAGERFATPGDLHGQLDAEEFKLYELIWQRTVASQMADA
KGTSMKVTITGNNAEFSATGRTITFPGFLRAYVEVSTLADGRNVADNAEHHLPRLAEGDG
VETKNLEADGHSTNPPARYTEASLVKKMEDLGIGRPSTYASIIKTIQDRGYVYSRGNALV
PSWVAFAVIGLLEKSFAALVDYDFTSSMEDELDEIAAGHENGAHWLTGFYFGDAEASDAK
AESIARHGGLKALVGDNLEQIDARLVNSLPLFKDQEGRDVNVRVGRYGPYLERQVGVSED
GEPEYQRANLSDSTTPDELTLELAEKLFATPQSGRELGRNPKNNRMIVAKEGRFGPYVTE
LVNDDERTEVEAKAEEIVAAEREAEDLQRAAEGKRAKNWGTKTAAAQKEKRIAQIIEETL
KPGTASLFKTMEPSSVTLDEALQLLALPREVGVDPSDNEVITAQNGRYGPYLKKGSDSRT
LASEDQIFSITLDEARRIYAEPKRRGRGATSQSVIKQLGDNDVSGKPMSVRDGRFGPYVT
DGTTNASLRRGDDPMQLTEARANELLSERRAKEAADGGSSKKATKKASKKTTKRVAKAGA
RKKK
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaagactgggaacaagcgtctggtcatcgtcgagtctgcgacgaaggccaaa
aagatcgcaccgtatcttggcgatgactacatcgtcgaggcatcggtcggtcatatccgt
gacctgccgcggggtgctgcggacgttcccgctaagtacaaaaaggagccatgggcgcgc
ttaggcgtgaacaccgacaaaggctttgagccgttgtacgtggtcagcccagataaaaag
aagaaggtggccgatcttaaagccaagctcaagcttgtcgacgagctcttcctagccaca
gaccccgaccgcgagggtgaagccatcgcttggcatctgcttgaagtactcaaacccaag
gtgccggtcaagcgcatggtgtttaacgagattactaagcctgcgattcttgccgctgcg
caaaacacccgcgaactcgacgataacctcgtagacgcccaagaaacacgccgtatcctc
gaccgcctctacggctacgaggtatccccagtgctgtggaaaaaggtcatgccacgcctg
tccgccggacgcgtgcagtccgtggccacccgcgtgatcgtagagcgcgagcgtgagcgc
atggcgtttatctccgctgattactgggacgtggaggcggaattcgataccggcaagcct
gcacaagatagcaacccaacctcctttacgggccgattgacggctttggacggcaagcgc
gtggctaccggccgtgacttcaacgaccgtggtgagctcaaaggtgatgcggtggtcgtc
gacaagcagcgcgctgaggccctcgtcgaagagctaaccggcgttgcaatgagcgtgacc
aaggtggaggaaaagccttacacccgccgcccctacgcgccatttatgacctcaaccctg
cagcaagaggccggccgcaagctgcactacacctccgaacgcaccatgcgtatcgcgcag
cgactgtacgaaaacggccacatcacctacatgcgtaccgactccaccactttgtcggaa
caaggcctcaaagccgcccgtgaacaggcaatttccctgtacggtgccgactacgtggca
gacacaccacggcgctacgaccgcaaagtgaaaaactcccaagaagcccacgaggcgatc
cgtcccgcaggtgagcgatttgccaccccaggcgacctccacggccaactcgacgcggag
gaattcaaactctacgaactgatctggcagcgcaccgtggcctcccagatggccgacgcc
aagggcacctccatgaaggtgaccataaccggcaacaacgccgaattctccgcaaccggc
cgcaccatcaccttccccggtttcttgcgcgcctacgtggaagtcagcacgcttgccgac
ggccgcaacgtcgccgacaacgccgagcaccacctgccgcgcctagctgaaggcgacggc
gtagaaaccaagaaccttgaagccgacggacactccaccaacccaccagcgcgctacacc
gaagccagcctagtcaagaagatggaagacctcggcattggccgcccatcaacgtatgcg
tcgatcatcaaaaccatccaagaccgcggctacgtgtactcccgaggcaacgccctggta
ccaagctgggtagcattcgccgtgatcggcctgctggaaaagagcttcgcagccctcgtc
gactacgacttcacctcctccatggaagacgaactcgacgagatcgcagccggccacgaa
aacggtgcccactggcttaccggcttctacttcggtgatgctgaagcctccgacgccaaa
gcagagtcaattgcccgccacggtggtctgaaggcactcgtcggcgataacctcgaacaa
atcgacgcacgcctcgtcaactcgctgccactgtttaaagaccaagaaggtcgcgacgtc
aacgtacgtgttggccgctacggcccttacctcgaacgccaagtcggcgtgagtgaagat
ggcgagccagagtaccagcgcgcgaacctctcggattcgaccaccccagacgaactcacc
ctcgaactggcagaaaagctctttgccaccccgcagtccggccgtgagctaggccgcaac
cccaagaacaaccgcatgatcgtggctaaggaaggccgctttgggccctacgtcaccgag
ctagtcaacgacgacgagcgcaccgaggtagaagccaaagccgaagagatcgtcgccgct
gaacgtgaggcagaagacctccagcgtgccgccgagggcaagcgcgcaaagaactggggt
accaagaccgcagcagcgcaaaaagaaaagcgcatcgctcagatcatcgaggaaaccctc
aaaccaggtaccgcctcgttgttcaagacaatggagccctcttccgtcaccctcgacgaa
gcactccagctgctggccctaccacgcgaagttggcgttgaccccagcgacaacgaagtg
atcaccgcccagaatggtcgctacggcccatacctgaagaagggcagcgactcgcgtacc
cttgcgagcgaggaccagatcttcagcatcaccctcgacgaagcacgccgcatctacgcg
gagcccaagcgtcgcggtcgcggagccacctcacaatcggtaatcaagcaactcggtgac
aacgacgtctccggcaagcccatgtcggttcgcgacggccgcttcggcccctacgtcacc
gacggcaccaccaatgcgtcgctacgccgtggcgacgaccccatgcagctcaccgaagcg
cgcgccaatgagctcctctccgagcgtcgcgccaaagaagctgccgacggtggctcatcg
aagaaagcgacgaaaaaagcctcgaaaaagaccaccaagcgcgtggccaaagcgggtgct
cgcaagaagaaatag
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