Corynebacterium diphtheriae BH8: CDBH8_1461
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Entry
CDBH8_1461 CDS
T01698
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cdb
Corynebacterium diphtheriae BH8
Pathway
cdb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cdb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CDBH8_1461 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cdb03019
]
CDBH8_1461 (pnp)
03016 Transfer RNA biogenesis [BR:
cdb03016
]
CDBH8_1461 (pnp)
Enzymes [BR:
cdb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CDBH8_1461 (pnp)
Messenger RNA biogenesis [BR:
cdb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CDBH8_1461 (pnp)
Transfer RNA biogenesis [BR:
cdb03016
]
Prokaryotic type
tRNA degradation factors
CDBH8_1461 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH_2
KhpA-B_KH
Motif
Other DBs
NCBI-ProteinID:
AEX48981
LinkDB
All DBs
Position
complement(1502787..1505054)
Genome browser
AA seq
755 aa
AA seq
DB search
MSTKPSNVVFNIDEEFGITEAIATIDNGDFGKRTIRFETGQLARQADGSVTTYLDDDTML
LATTTASNQPREGFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTEAILACRLIDRPLR
PTFVKGLRNEVQVVITVLSVNPQDMYDVVAINGASAATQLSGLPVSGPVGGVRMALIADD
AHPKGQWIAFPTHEQHEQALFELVVAGRIVSKKQGKKTVDDVAIMMVEAGATEQVVDRVK
AGAPAPTESVVAEGLEAAKPFIEVLCRAQAGLAERAAKETQEFPLFPPYTDVVYDAVEKK
VSKKLRSLLTIKSKQDRDEATNAYMEEIEADLIAQLGSDDEAAASKAIRAAYNAVMKKIV
RHMILTEHFRIDGRGVTDIRDLGVEVDLIPRAHGSSLFERGETQILGVTTLDMLKMEQQI
DSLTPATSKRYIHHYNFPPYSTGETGRVGSPKRREIGHGALAERALVPVIPSREEFPYAI
RQVSEALGSNGSTSMGSVCASTLSLYNAGVPLKAPVAGIAMGLVSDEVDGETRYVALTDI
LGAEDAFGDMDFKVAGTRQFITALQLDTKLDGIPSEVLAQALSQANDARNTILDTMAEVI
ETPDEMSDYAPRITAITVPVNKIGEVIGPKGKTINSITEETGASISIEEDGTVYVSAASG
AAAEAAIEKINAIANPQLPKVGERFLGTVVKTTAFGAFVSLLPGRDGLVHISKLGGGKRI
EKVEDVVNVGDKLEVEILDIDNRGKISLAPVKNED
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
ttgagcacaaagccttccaacgtcgtctttaacattgacgaggaatttggaatcaccgag
gcaatcgcaaccatcgataacggtgattttggaaagcgcaccatccgttttgagaccggc
cagttggcacgccaagcagacggatcagttacaacctatcttgacgacgacacgatgttg
ttggcaacgaccacggcatctaatcagccacgtgaaggattcgatttcttcccgctgaca
gtcgacgttgaagagcgtatgtacgcagctggtaggatcccaggatcgttcttccgtcgt
gaaggccgtccttccaccgaagcaatcttggcttgccgtttgatcgaccgcccgttgcgc
cccacctttgttaaggggctacgcaacgaggttcaagtagttatcactgttctttccgta
aacccgcaagacatgtacgatgtcgtggcaattaacggtgcctctgcagcaactcagttg
tctggtttgccggtttctggtcctgttggcggtgtccgaatggcactgatcgcagacgat
gctcaccctaaggggcagtggattgctttccctactcatgaacagcatgaacaagcactc
tttgagctcgtcgtagcgggacgtattgtctcgaagaagcaaggtaaaaagaccgttgat
gatgttgccatcatgatggttgaggctggtgctactgagcaggttgtagatcgagttaaa
gctggagctccagctcctacagaatctgtggttgcagaaggtcttgaggctgctaaacca
ttcattgaggttctttgccgtgcgcaggctggattggccgagcgtgcagccaaggaaacc
caagaattcccactcttcccgccatacactgacgttgtttacgatgcagtggagaagaag
gtttctaagaaactgcgttcgttgctcacgatcaagtccaagcaagatcgtgatgaggca
acgaatgcttacatggaagaaatcgaagcagatctgattgcccagctcggatctgatgat
gaggcggctgcatctaaggcaattcgtgcagcatacaatgctgtaatgaagaagattgtc
cgtcatatgatcttgacggaacacttccgcatcgacggtcgcggtgtcaccgatattcgt
gatttaggtgtggaagttgacctcatcccacgcgctcatggttcgtccttgttcgagcgt
ggcgagactcagattctgggtgtgaccactctcgatatgctcaagatggagcagcagatc
gattcattgactccagcaacttcgaagcgttatatccaccactacaacttcccaccgtat
tccactggtgaaactggccgtgttggctcacctaagcgtcgcgaaattggccacggtgct
ttggctgagcgtgcactggttcctgtgatcccaagtcgtgaagagttcccttatgcaatc
cgacaggtgtctgaggctttgggttcgaacggctctacctcgatgggctctgtatgtgcg
tccaccttgtctttgtacaacgcaggtgtaccgttgaaggctcccgttgctggtattgcg
atgggcttggtgtctgatgaagtagacggtgagactcgttatgtcgctttgactgacatc
ttgggtgcagaagacgcctttggtgatatggacttcaaggttgctggtactcgccagttc
attaccgctttgcagctagatacaaagcttgatggcattccttctgaggtgcttgctcag
gcactatcccaagcgaatgatgcgcgtaacaccattttggatacgatggcagaagtaatc
gaaactccagatgagatgagcgactacgcgccacgtattactgcgattaccgttccagtg
aacaagatcggtgaggttatcggtccaaagggcaagaccattaactctattaccgaagaa
actggcgctagcatttctattgaagaagacggcacagtttatgtttcggccgccagcggt
gctgctgcagaggctgcaatcgaaaagattaacgctatcgctaacccacagctgcctaag
gtcggagagcgtttcctcggcactgtcgtaaagaccactgcatttggggctttcgtatcc
ttgctgccaggacgcgacggactggttcacatctccaagcttggtggtggcaagcgtatc
gaaaaggttgaagatgtagtcaacgtgggagataaactcgaggttgaaatcctagatatt
gacaaccgcggcaagatttccttggctccagtgaaaaacgaggactaa
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