KEGG   Clostridioides difficile CD196: CD196_0018
Entry
CD196_0018        CDS       T00997                                 
Symbol
recD
Name
(GenBank) recombination protein
  KO
K06187  recombination protein RecR
Organism
cdc  Clostridioides difficile CD196
Pathway
cdc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cdc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CD196_0018 (recD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cdc03400]
    CD196_0018 (recD)
DNA repair and recombination proteins [BR:cdc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     CD196_0018 (recD)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      CD196_0018 (recD)
SSDB
Motif
Pfam: Toprim_4 RecR_HhH Toprim RecR_C RecR_ZnF HHH HHH_5 IMS_HHH HHH_8
Other DBs
NCBI-ProteinID: CBA60073
UniProt: A0A0H3N782
LinkDB
Position
22387..22986
AA seq 199 aa
MQVYTGPITRLIEEFSKLPGVGRKTAQRLAFHIINMNTNDVEALSKAIIDAKREIRYCSI
CCNITDTDPCSMCSNKSRDSSVICVVEDPRDVAAMERTREFKGQYHVLNGVISPMDGIGP
DMLKIKELIQRLGNQEVKEIIMATNPTIEGEATAMYIARLVKPMGIKVTRIAHGLPVGGD
LEYADEVTISKALEGRREI
NT seq 600 nt   +upstreamnt  +downstreamnt
atgcaagtttatacaggtcccataacgagacttatagaggaattttcaaagcttcctgga
gtaggaagaaagactgctcaaagattggcttttcatattattaatatgaatactaatgat
gtggaagctttatctaaagcgattatagatgcaaaaagagaaataagatattgctcaatt
tgttgtaatataacagatacagacccatgtagcatgtgttcaaataaaagtagagattca
agtgttatatgtgttgtggaagatccaagagatgtagcagctatggagagaacgagagag
tttaaaggacagtatcatgtattaaatggagtaatttctccaatggatggaattggacca
gatatgttaaaaataaaggaacttatccaaagacttggcaatcaggaagtcaaagaaata
ataatggcaacaaatcctactattgaaggtgaagcgacagccatgtatattgctaggtta
gtaaaaccaatgggaatcaaagtcactcggatagctcatggtcttcctgttggaggcgat
ttagagtatgcagatgaggtcacaatatcaaaagcactagaaggcagaagagaaatataa

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