Clostridioides difficile CD196: CD196_2660
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Entry
CD196_2660 CDS
T00997
Name
(GenBank) ABC transporter, ATP-binding/permease protein
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cdc
Clostridioides difficile CD196
Pathway
cdc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CD196_2660
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cdc02000
]
CD196_2660
Transporters [BR:
cdc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CD196_2660
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_21
AAA_29
MMR_HSR1
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
CBA65098
UniProt:
A0A0H3N6E7
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All DBs
Position
complement(3118012..3119778)
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AA seq
588 aa
AA seq
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MITLSQKLRKEKNMKLILSYLKNYKLLIVLNILAIFSFALVELGIPTIIAKIIDNGIANQ
NIAYIKQMGIVIVIISIIGVVGSILLGYCSAKVSTSVTRDIRNDIFEKSQEFSHTEYNKF
GISSMITRTTNDAFQIQQFVNILLRTALLTPVMFIISIIMTIRTSVELSIVLAISVPFII
IGVAIIAKVSQAISSKQQKGLDKLNLISRENLTGIRVIRAFGNDDYETERFEKTNTYYAN
VSKKLFKLMSITQPAFFLLLNIAVLAVFWISSEKINIGELQVGQLVAFLEYLFHAMFSIM
LFSMVFIMYPRAEVSANRIKELLNEEPLIKNPENGIKDTENKGIIEFDNVTFTYPDGEAS
VLKDISFTAKTGETVAFIGSTGSGKSTLINLIPRFYDVTEGSIKINGVDIREYDLKALRK
KIGFIPQKSLLFTGSIANNIRFGKHKAGESELEYSARVAQAYEFISKKPRKFDELISEGG
ANVSGGQKQRLSIARAIIRRPEIYIFDDSFSALDFKTDAILRAKLKKETKDAIVLIVAQR
ISSIIDADKIIVLNEGQVVGMGTHKELLKNCEIYYEIATSQLKKEELE
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgattacactatctcaaaaattaagaaaggagaaaaatatgaaattaattttaagttat
ttaaagaattataagttattaatagtattaaacatactggctatatttagttttgcatta
gtcgagttggggattccaactataatagctaaaataattgacaatggtattgcaaatcag
aatatagcttacataaaacaaatgggaatagtgattgttattatttctattataggggtt
gtaggtagtatattgttgggttattgttctgctaaggtatcaacaagtgtaaccagagat
ataagaaatgacatatttgagaaatcacaagaattttcacatactgaatacaataaattt
ggaatttcttcaatgattacaagaacaacgaatgatgcatttcaaattcaacaatttgtt
aatatactactaaggactgccttattaactccagttatgttcatcataagtataataatg
acaattagaacaagtgtggaactttctatagtattggctatatcagtaccttttataatt
attggagtagcaataatagcaaaagtatctcaggcaatatcttcaaaacaacaaaaagga
ctagataaattaaaccttatatcgagagaaaatttaactggaataagagtaattagagct
tttggaaatgatgattatgaaacagagcgatttgaaaaaacaaatacatattatgctaat
gtttctaagaaactatttaagcttatgtcaattactcaaccagcattctttttactatta
aatatagctgttttggctgtattttggatttcaagtgagaagataaatattggagagctt
caagttggacagttggttgcatttttggaatatcttttccatgccatgttttcaattatg
cttttttcaatggtatttattatgtatccaagagcagaggtatctgcaaatagaataaaa
gaacttttaaatgaagaaccattgataaaaaatcctgaaaatggaattaaggatactgaa
aataagggtatcatagaatttgataatgtaacttttacctatccagatggagaagcttct
gtacttaaggatatttcatttactgcaaaaacaggtgaaacagtcgcttttataggaagt
actggtagtgggaaaagtactctaattaacttgatacctagattttacgatgtaacagag
ggtagcattaagataaatggagtagatataagagaatatgatttaaaagctttaagaaaa
aagataggattcatacctcaaaaatcactgctttttactggtagcatagcaaataatatt
agatttgggaaacataaggcaggagagtcagaattagaatattccgcaagagttgcacaa
gcatatgagtttatatcaaaaaaacctagaaagtttgatgaattgattagtgaaggtgga
gcaaatgtatcaggaggtcaaaaacaaagactttctattgcaagggctattataagaaga
cctgaaatatacatttttgatgatagtttttctgcacttgactttaaaacggatgcaata
cttcgtgctaaattgaagaaggaaacaaaagatgcaattgtattgattgttgcccagaga
attagttctattattgatgctgataagattatagtactcaatgaaggacaagttgtcgga
atgggaactcataaagaattattaaaaaactgtgaaatatactatgaaattgcaacatct
cagttaaaaaaggaggaattagaataa
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