Clostridioides difficile CD196: CD196_3186
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Entry
CD196_3186 CDS
T00997
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
cdc
Clostridioides difficile CD196
Pathway
cdc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cdc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CD196_3186 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cdc03400
]
CD196_3186 (uvrC)
DNA repair and recombination proteins [BR:
cdc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CD196_3186 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH_2
GIY-YIG
HHH_5
UVR
RE_Eco29kI
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
CBA66452
UniProt:
A0A0H3NBJ5
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Position
complement(3775867..3777684)
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AA seq
605 aa
AA seq
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MFDIQEHLKKLPSEPGVYLMKDKYDHIIYVGKAISLKNRVRQYFQSSKNHTSKVKSMVKN
IYKFEYIITDSELEALILECNLIKRYRPKYNVVLRDDKTYPYIKVTTNEDYPRILKVRRV
LKDKAKYFGPYTNITAVNDTLELISSTYPIRSCKIDIDKAIKNKTRPCLNLHINKCLGPC
TGNVSKEEYGKMIEEIIMCLSGKEEKLMELLKEKMNESSMNFRFEEAAVYRDKIKSLEEM
IQKQKIDATVSDLNQDVVAMARAHNEACVQVFFIRNGKIVGREHFILEGVMDSPRASILS
SFVKQFYNEQEYIPKELIIEDEIEDSSILEEWLSSKKGQKVTIRVPQKGEKKSLVEMVRK
NAVEYLEKFSDMNKRKYEKSIGALEELKQILNLEKLPIRIEAYDISNIQGVDSIGSMVVY
TNAKKDKKEYRRYKIKTVIGPNDYDSMAEIVDRRLKHGNLPDLILLDGGKGQVSAVKKVL
ELNDVDIPLWGMYKDDKHRTKGLICKEKEIELDKTTNLYRFIASIQEEVHNYAITYHRSL
RNKALTKSILDDIQGIGEKRKKSLLNHFKDVEAIKKATMEELLEVDGMNKSIADNVYNFF
RKEEN
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatatacaagagcatttaaaaaaattaccttctgagcccggagtatatttaatg
aaagacaaatacgaccatataatatatgtgggaaaagccatatctctaaaaaatagggta
aggcagtattttcaatcttcaaaaaaccatacatctaaagtaaaatctatggttaagaat
atatataagtttgagtatattataacggattcagagttagaggcattaatacttgaatgt
aatttaataaaaagatacagaccaaagtataatgtagtgcttagagatgataaaacttat
ccatatataaaagtaactacgaatgaagattatccaagaatcttaaaagttagaagagtt
cttaaagataaggcaaagtattttggaccctataccaatataactgctgtgaatgatacc
ttggagcttataagtagtacgtatccaataagaagctgtaaaatagatatagataaagca
ataaagaataagacaagaccttgtttaaatctacacataaataaatgtttaggaccttgt
acaggaaatgtttctaaagaagagtatggaaaaatgatagaagagattataatgtgttta
tctggtaaagaagaaaaattgatggaacttttaaaggaaaaaatgaatgagagttctatg
aactttagatttgaagaggctgctgtatatagggataagataaagagccttgaagagatg
atacagaaacaaaaaatagatgctactgtaagtgacttaaaccaagatgtggttgcaatg
gcaagagctcataatgaagcttgtgtccaggtattttttataagaaatggtaagattgta
ggtagggaacattttatattagaaggtgtaatggatagtccaagagcttctatattaagt
tcatttgtaaaacaattttataatgaacaagagtatatacctaaagaattaattatagaa
gatgagatagaagatagttctatattagaagaatggctgtcatctaaaaaggggcaaaaa
gtaacaataagagttcctcaaaagggagagaagaaaagcttagttgaaatggttaggaaa
aatgctgtagaatatcttgaaaaattttctgatatgaataaaagaaaatatgaaaaaagt
attggagcattggaagaattaaaacaaatattaaatctagaaaagttgccaataagaata
gaggcttatgatatatcaaatatacaaggtgtagattcgattggttctatggtagtgtat
acgaatgctaaaaaagataagaaggaatataggagatataaaataaagacagttattgga
cctaatgattatgattctatggctgaaattgtagatagaagattaaaacatggaaattta
cctgacttgatattgttggatggtggaaaaggacaagttagtgcagtaaaaaaagtacta
gaactcaatgatgtagatatacctctttggggaatgtacaaagatgataagcatagaact
aaaggattgatatgcaaagaaaaagaaatagaactagataaaacaactaatttatataga
tttattgctagtatacaagaagaagttcataattatgcaataacatatcatagaagtcta
agaaataaagctttgacaaaatctatcttagatgatatacaaggaataggtgaaaaaaga
aagaaatcattattaaatcactttaaagatgtagaggctataaaaaaagctactatggaa
gaacttttagaagtagatggaatgaataaaagcattgcagataatgtttataattttttt
agaaaggaagaaaattaa
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