Clostridioides difficile 630: CD630_28310
Help
Entry
CD630_28310 CDS
T00487
Name
(GenBank) putative adhesin
Organism
cdf
Clostridioides difficile 630
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpaA
Collagen_bind
DUF11
EURL
Big_8
Motif
Other DBs
NCBI-ProteinID:
CAJ69719
UniProt:
Q183R6
LinkDB
All DBs
Position
complement(3303646..3306564)
Genome browser
AA seq
972 aa
AA seq
DB search
MKKGNRKALLISLIMILSMVVSTIYPTVSYASELGENSQIQSGSTNSSTGEEKESDNKKP
EQTPEKDKATDNKKPEQTPEEEKPTDNKKPEQTPEEDKSTDNKKPEQTPEGEKPIDNKKP
EQIPEEDKSTDNKKSEQALEDEKPLDNKNTEKTPEEDNLLEDENLLKVLEEELNEENEDY
GFVVKINNNTIETESMKKISFNLTYTPTSKGIQAGDSITFKVPDVFNKVNLDYTSECFDK
TESNGEYTLTFRELPNGQSVMQGKIGLEAYVKKVDEDTNAKIHIETTGKIESGSGDIDVE
IKPGDKTDVPDAKGTLKKLVEGKKSTTVFMPVKNKDINYSIQVNEKQEELKDIILYDELP
EGLTLINGSVSVVTSDGKEVSDFNIEQSKNSISVNFGNIDKSYTVKYKARISDKNAKHGN
KYKNVARIESDGKKIQEDDATVSIFDRGDDYLLTKGHSGATNITQVGQVINYQISINDDK
SPISNVVITDNIPEGMRLTTSGEAGHDFRVVEIPMNGSWTPWSKEKIANNISYKVEEKRN
ESGQVDKVITGFTINLSKEEVESKFFIAYTLKVISIEDSYINRAVLDANNSEIDKNDEIN
FKKNSGLISAKKEVDKKVLNSSDNQIVKYKINMSTYGVYDAGQVNLLDEVNSVLEISNIK
YSDNLELKKEAGDGKNTIRLVNKYEFKQIKEGEPVQSWVTFDANFTNVKVGETIRNVAQI
NGSSPPGVETTKQGYAFEAKKVDALDKNVLSGAKFNLEDAFGNIVVKDLVSDEDGIIQSS
VKNPGTYYLVEIMAPRGYEKLKDKIKVEIGNKDIGRIVDIGNIENIRQENPPVNPPAPPN
TDEPIVNPPVPPSTDKPRKPSSSSDTEDTIVINPPVPPSEDIINPPIPEVLNPPVPPSEE
MIETPVKQIIPIPEVVKPSVSEEKNNKVKDDTLVNPPVPPKTGDSTTIIGEILLVIGAIV
GLIVLRRNKNTN
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaggaaatagaaaggcattattaattagtttaattatgattttaagtatggtg
gtgtctacaatatatccaactgtatcttatgcttcagaattaggagagaatagtcagatt
caaagtggttcaactaattcatcaactggagaggagaaggaaagcgacaataaaaagcca
gaacagactccagagaaagataaggcaacagataataaaaaaccagaacagaccccagag
gaagaaaaaccaacagataataaaaaaccagaacagaccccagaagaagataagtcaaca
gataataaaaagccagagcaaactccagaaggagaaaagccaatagataataaaaagcca
gagcagataccagaagaagataagtcaacagataataaaaagtcagaacaagctttagaa
gatgaaaaaccactagacaataaaaatacagaaaaaactccagaggaagataatctatta
gaagatgaaaatttattgaaagttttagaagaagaacttaatgaagaaaatgaagactat
ggatttgttgtaaaaattaataacaatacaatagaaacggaatcaatgaaaaaaatatca
tttaatttaacttatactccaacatcaaaaggaatacaagcaggagattcaataactttt
aaggtgccagatgtattcaataaagttaatttagattatacaagtgaatgctttgataaa
acagaaagtaatggagagtatacacttacatttagagaattacctaatggccaaagtgta
atgcaaggtaaaataggtttggaagcatatgttaaaaaggttgatgaagatactaatgca
aaaatacatattgaaactactggaaaaatagaaagtggaagtggagatatagatgtagaa
ataaaacctggagataaaacggatgttccagatgctaaaggaacacttaaaaagcttgtt
gaaggaaaaaaatcaactactgtatttatgccagttaaaaataaagatataaattacagt
atacaagtaaatgaaaagcaggaagagttaaaagatattattttgtatgatgagcttcct
gaaggattgacattgataaatggttctgtaagtgtagtaacaagtgatggaaaagaagtt
agtgattttaatattgaacagagtaaaaattctatttcagttaattttggaaatatagat
aaatcgtatactgttaagtataaggctagaatcagtgacaaaaatgcaaaacatggtaat
aaatataagaatgtagctaggattgaatctgatggtaagaagatacaagaagatgatgct
actgtaagtatatttgatagaggagatgattatcttcttactaaaggacattcaggagca
acaaatattactcaagttggtcaagtaataaactatcagatttcaataaatgatgataaa
tcaccaataagtaatgttgttataacagataatataccagaaggcatgagattaactact
tcaggagaagctgggcatgattttagagttgtagaaattccaatgaatgggagctggact
ccttggagtaaagaaaaaattgccaataatatttcatataaagtagaagaaaaaagaaat
gaaagtgggcaagtagataaagttataactggatttacaattaatctcagtaaagaagaa
gtggaatcaaagttttttatagcttatacattaaaggtaattagtattgaagatagctat
ataaatagagctgttcttgatgcaaataatagtgaaattgataaaaatgatgagataaac
tttaagaaaaattctggattaataagcgcaaaaaaagaagttgataaaaaagttttaaac
agtagtgataaccagattgttaaatacaaaatcaatatgtcaacttatggagtttatgat
gcaggacaagtaaatcttttagatgaagtaaactcagttctagaaatatctaatataaaa
tattctgataatcttgaacttaaaaaagaagctggagatggaaaaaatacaataagatta
gtaaataaatacgaatttaaacagataaaagaaggggaacctgtgcaaagttgggttaca
tttgatgcaaacttcacaaatgtaaaagttggggagactatacgaaatgtggctcagatt
aatggttcaagtcctccaggagtagagactactaagcaaggttatgcttttgaagctaaa
aaagtggatgctttagataaaaatgtactttcaggtgctaagttcaatttagaagatgca
tttggaaatatagtagttaaggatttagtcagtgatgaagatggtataattcaatctagt
gtaaaaaacccaggaacatattatttagtggagataatggctccacgtggatatgaaaaa
ctgaaggataaaattaaggttgaaattggtaataaagatattggtagaatagtggatatt
ggaaatatagaaaacataagacaagaaaatccaccagtaaatccaccagcaccaccaaat
acagatgaaccaatagtaaatccaccagtaccaccaagcacagataaaccaaggaaacca
tcaagttcatctgatacagaggatactatagttataaatccaccagtaccaccatcagaa
gatataataaatccgccaataccagaggtattgaatcctccagtaccaccatcagaagag
atgatagaaactcctgttaaacagattattccaataccagaagtagtaaagccatcagtg
tcagaagaaaaaaataataaagttaaagatgatactttggtaaatccaccagtaccacca
aaaacaggggatagtactacaattattggagaaatacttttagttataggagctattgta
ggacttatcgtattaagaagaaataaaaatacaaattag
DBGET
integrated database retrieval system
