Carnobacterium divergens: BFC22_02235
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Entry
BFC22_02235 CDS
T05644
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cdj
Carnobacterium divergens
Pathway
cdj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cdj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BFC22_02235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cdj03021
]
BFC22_02235
03400 DNA repair and recombination proteins [BR:
cdj03400
]
BFC22_02235
Enzymes [BR:
cdj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BFC22_02235
Transcription machinery [BR:
cdj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BFC22_02235
DNA repair and recombination proteins [BR:
cdj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BFC22_02235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
ANZ98991
LinkDB
All DBs
Position
485390..488965
Genome browser
AA seq
1191 aa
AA seq
DB search
MAGHLVNYGKHRTRRSFARISEVLELPNLIEIQTDSYQWFLDEGLREMFKDISPIEDFAG
NLSLEFIDYQLHNPKYTVEEARSHDANYSAPLHVKLRLINKETGEVKDQEVFFGDFPLMT
EMGTFIINGAERVIVSQLVRSPGVYFHGKVDKNGKQGFGSTVIPNRGAWLEYETDAKDLS
YVRIDRTRKIPLSVLVRALGFGSDDQILEIFGDNESLRLTLEKDLHKNSSDSRTEEALKD
VYERLRPGEPKTADSSRSLLNARFFDPKRYDLANVGRYKVNKKLNLKTRLFNQTLAETLV
DPETGEILAEKGTFLDRPMIDKLTPFLDAGLNSVTLYPTDDGVVPEPVTIQVVQVISPKD
GERVVNVIGNGNVSTDIKNITPADILASMSYFFNLQENIGNVDDIDHLGNRRIRSVGELL
QNQFRIGLSRMERVVRERMSIQDVATVTPQQLINIRPVVAAIKEFFGSSQLSQFMDQTNP
LGELTHKRRLSALGPGGLTRDRAGYEVRDVHYSHYGRMCPIETPEGPNIGLINSLSSYAK
INKFGFIETPYRRVDRETGKVTKHIDYLTADEEDHYVVAQANSVLLEDGSFESDIVMARF
ISENLEVPISRVDYMDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLIHPQAP
LVGTGMEYKSAHDSGAALICKNPGVVEYVDAKEVRVRQDNGALDKYSITKFRRSNSGTCY
NQRPIVSKGDRVDASEILADGSSMENGEMALGQNVLVAFMTWEGYNYEDAIIMSERLVKD
DVYTSVHIEEYESEARDTKLGPEEITREIPNVGEDALKDLDEFGIIRIGAEVHDGDLLVG
KVTPKGVTELSAEERLLHAIFGEKAREVRDTSLKVPHGGGGIVHDVKIFTREAGDELSPG
VNMLVRVYIVQKRKINEGDKMAGRHGNKGVVSRIMPEEDMPFLPDGTPVDIMLNPLGVPS
RMNIGQVLELHIGMAARQLGIHIATPVFDGASEEDVWETVQEAGMASDAKTVLYDGRSGE
PFDNRVSVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALE
AYGAAYTLQEILTYKSDDVVGRVKTYEAIVKGEKIPRPGVPESFRVLVKELQALGLDMKV
LDANDDEIELRDLDDDDDIVNIDALSKYAEEQEKIRADAREKERLEQEGAE
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggccacttagtaaattacggaaaacaccgtacacgaagaagttttgcacgaatc
agcgaggttttagagttaccaaacttaattgaaatccaaactgactcataccaatggttc
ctagatgaaggattgcgtgaaatgtttaaagatatctcaccaattgaagactttgcagga
aacctatcattagaatttattgattatcaattacacaacccaaaatacacagttgaagaa
gcgagaagccatgatgccaattactcagctccgcttcacgtgaaattacgtttaatcaac
aaagaaactggtgaagtaaaagaccaagaagtattctttggcgatttcccattaatgact
gaaatgggtacatttattatcaacggagcagagcgtgttattgtatcacaattagttcgt
tcaccaggggtttacttccatggtaaagttgataaaaatggcaaacaaggttttggttct
actgttatccctaaccgtggagcatggttagaatatgaaacagatgcaaaagatctttct
tatgtaagaatcgaccgcacacgtaaaattccactttcagtattagttcgtgctttagga
tttggatcagatgatcagatcttagaaatttttggcgataatgaaagtctacgtttaacg
ttagaaaaagatttacacaaaaattctagcgattctcgtacagaggaagccttgaaagat
gtttacgaacgtctacgtccaggtgagcctaaaactgctgacagctcaagaagcttgcta
aatgctcgtttctttgatccaaaacgctacgacttagcaaatgttggtcgttacaaagtc
aacaaaaaactaaaccttaaaacccgtctatttaaccaaactcttgctgaaacattagtt
gatcctgaaactggtgaaattttagcagaaaaaggaacgttcttagatcgtccaatgatt
gataaactaacaccattcttagacgcaggtctaaacagtgtgactttatatccaacagat
gatggtgttgtaccagaacctgtaacgattcaagtagttcaagtaatttcaccaaaagat
ggcgaacgtgttgttaatgtgattggaaacggcaacgtttcaactgacatcaaaaacatt
acgccagctgatatcttagcttcaatgagctatttcttcaacttacaagaaaatatcggc
aacgtagacgacattgaccatttaggaaaccgtcgtatccgttctgttggagaattatta
caaaatcaattccgtattggtttgtcacgtatggaacgtgttgttcgtgaacgtatgtcg
attcaagatgttgcaaccgtaacaccgcaacaattaatcaacattcgcccagttgtagca
gcaatcaaagaattctttggttcttctcaattgtcacagttcatggatcaaacgaatcca
ttaggtgagttgactcacaaacgtcgtctatctgccttagggcctggtggtttgacaaga
gaccgtgccggatatgaagttcgagatgtacattattcccattatggtcgtatgtgtcct
atcgaaacacctgagggtccaaatatcgggttgattaatagtctatcaagttatgcaaaa
attaataaatttggttttatcgaaacaccataccgtcgtgtggatcgtgaaactggtaaa
gtaacaaaacacattgattatttaacagcagacgaggaagatcactacgttgttgcccaa
gcaaactcagtattgcttgaagatggtagctttgaaagtgacatcgtgatggctcgtttc
atcagtgaaaacttagaagttccaattagccgtgtcgattacatggacgtttcaccaaaa
caagtagttgctgttgcgacagcatgtattccgttcttggaaaacgatgatagtaaccgt
gcgttaatgggagccaacatgcaacgtcaagctgtaccgttgattcatccacaagctcca
ctagttggaactgggatggaatacaaatcagcacacgattcaggagctgcattaatttgt
aaaaatcctggtgtcgttgaatatgtagatgctaaagaagttcgtgttcgtcaagataac
ggcgctttagacaaatactcaatcacaaaattccgtcgttcaaactctggtacatgttac
aaccaacgtccaatcgtttctaaaggcgaccgtgtggatgctagcgaaatcctagctgat
ggttcttcaatggaaaacggtgagatggcattaggacaaaatgttttagtggccttcatg
acttgggaagggtacaactatgaggatgcgattatcatgagtgaacgtctagttaaagat
gatgtttacacttctgtccatattgaagaatatgaatcagaagctcgtgatacaaaactt
ggacctgaagaaatcactcgtgaaattccaaatgtcggagaagacgcattaaaagactta
gacgaattcggaattatccgtattggggctgaagttcatgatggcgatttattagttggt
aaagtaactcctaaaggggtaaccgaattatctgctgaagaacgtctattacatgcgatc
tttggtgaaaaagctcgtgaagttcgcgatacatcattgaaagttccacatggtggtggc
ggaatcgttcacgacgttaaaatctttacacgtgaagcaggagacgaattatcacccggt
gtgaatatgttagtacgcgtttatatcgtacaaaaacgtaaaatcaacgaaggcgataaa
atggctggacgtcacggaaataaaggggtcgtttctcgcattatgccagaagaagacatg
cctttcttaccagacggcacacctgttgatatcatgttgaaccctcttggggtaccatca
cgtatgaatatcggacaagttcttgaattacacatcggaatggccgctcgtcaactagga
atccatattgcgactcctgtatttgatggagcaagcgaggaagatgtttgggaaactgta
caagaagcaggaatggcaagtgatgctaaaactgttttatacgatggacgtagtggtgag
ccatttgataaccgtgtttcagttggtgtgatgtatatgattaaattagcccacatggtt
gatgataaattacatgctcgttcaactggaccttactcattagttacacaacaaccactt
ggaggtaaagctcaatttggtggacaacgttttggagagatggaagtttgggcacttgaa
gcgtatggggcagcttatacactacaagaaatcttaacgtacaaatcagatgacgttgtt
ggacgtgtgaaaacatatgaagcaatcgttaaaggtgaaaaaattccaagaccaggtgtt
ccagaatcattccgcgtattagtaaaagagttacaagctttaggactagatatgaaagtt
ctagatgcaaatgacgatgaaatcgaattacgtgatttagatgatgatgacgatatcgta
aacattgatgcacttagtaaatatgcagaagaacaagaaaaaattcgtgctgatgctcgt
gaaaaagaacgtttagagcaagaaggcgcagaataa
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