KEGG   Camelus dromedarius (Arabian camel): 105094085Help
Entry
105094085         CDS       T04642                                 

Gene name
LIG4
Definition
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
cdk  Camelus dromedarius (Arabian camel)
Pathway
cdk03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cdk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    105094085 (LIG4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cdk03400]
    105094085 (LIG4)
Enzymes [BR:cdk01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     105094085 (LIG4)
DNA repair and recombination proteins [BR:cdk03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     105094085 (LIG4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DNA_ligase_IV BRCT BRCT_2 RNA_ligase mRNA_cap_enzyme APG17 LIG3_BRCT
Motif
Other DBs
NCBI-GeneID: 105094085
NCBI-ProteinID: XP_010984336
LinkDB All DBs
Position
Un
AA seq 911 aa AA seqDB search
MAASQTSQTVASHVPFADLCSTLERIQKSKGRAEKIRHFKEFLDSWRKFHDALHKNQKDV
TDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPTGARA
DAGDFAMIAYFVLKPRCLQKGSLTVQQVNDILDSIASNNSAKRKDLVKKSVLQLITQSSA
LEQKWLIRMIVKDLKLGFSQKTIFSIFHNDAEELHSVTTDLEKVCRQLHDPLVGLSDISI
TLFSAFKPMLAAIADIERIEKDMKHQSFYIETKLDGERMQMHKDGDVYQYFSRNGYNYED
QFGASPQEGSLTPFIHSTFKPDVQNCILDGEMMAYNPHTQTFMQKGNKFDIKRMVEDSDL
QTCYCVFDVLMVNNKKLGHETLRNRHEILNSVFTPIPGRIEIVQKTQAQTKKEVVDALNE
AIDKREEGIMVKHPLSIYKPDKRGEGWLKIKPEYVDELMDKLDILIVGGYWGKGSRGGMM
SHFLCAVAEKPTSGEKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFHKKAPPSSILC
GTEKPEVYIEPCHSVIVQVKAAEIVPSDMYKTGCTLRFPRIEKIREDKEWHECTTLDELE
QLRGQASGKLASKHLHIGGDDEPQEKKRKAAPKVKKVIGIIEHLKAPNLSNISKVSNIFE
DVEFCVMSGTDGHPKPDLENRIAEFGGYIVQNPGPDTYCVIAGAQNIRVKNIISSNKHDV
VKPEWLLECFQTKRCVPWQPRVMIHMCPSTREHFAREYDCYGDSYFVDTDLNQLKEVFSG
IKDPREQTPGEMAAVIADLEHRYSWDSSHLSMFRSHTVYLDLYTVINDLSTKIEGTRLAI
TALELRFHGAKVVSCLAEGVSHVIVGEDRSRVADFKAFRRALKRKFKILQECWVTESIDK
CELQEENQYLV
NT seq 2736 nt NT seq  +upstreamnt  +downstreamnt
atggctgcctcccaaacttcacaaactgttgcctctcacgttccttttgcagatttatgt
tcaactttagaacgaatacagaaaagtaaaggacgggcagaaaaaatcagacacttcaaa
gaatttttagattcttggagaaaatttcacgatgcccttcataagaaccaaaaagatgtc
acagactcgttttatccagccatgagacttatccttcctcagctggaaagagagagaatg
gcctatggaatcaaagagactatgcttgctaagctttacattgaactgcttaacctaccc
agagaaggaaaggacgcccttaagctcctgaattacaggacgcctactggagctcgtgca
gacgccggagacttcgcgatgattgcgtactttgtgttgaagcccagatgtttgcagaaa
ggcagtttaaccgtccagcaagtaaatgacattttagactccattgccagcaataattct
gccaaaaggaaggacctggtaaagaagagtgttcttcagcttataactcagagttcagca
cttgaacagaagtggctgatacggatgattgtaaaggacctcaagcttggttttagtcag
aagactatattttctatttttcataatgatgcggaggagttgcacagtgtcaccacagat
ttggagaaagtctgtaggcagctgcatgaccctttggtcggactcagtgacatttctatc
actttattctcagcctttaaaccaatgctggctgccatagcggatattgagcgaatcgag
aaggacatgaaacaccagagtttctacatcgaaaccaagctagacggcgagcgcatgcag
atgcacaaagacggggatgtgtaccagtacttctcgcgaaacgggtacaactacgaggac
cagtttggtgcttccccacaggaaggctctctgacgccgttcattcacagtacattcaag
ccagacgtgcagaactgtatcctggacggtgagatgatggcctacaaccctcatacgcaa
acgtttatgcagaaggggaataagtttgatattaaacgaatggttgaagattctgatctg
caaacttgttactgtgtttttgatgtgttgatggttaataataaaaagctaggacatgag
accctgagaaacaggcatgaaattctgaatagtgttttcacaccaatcccaggtagaata
gaaatagtgcagaagacacaagcccagactaagaaagaggtagttgatgctttgaatgaa
gcaatagataaaagagaagagggaatcatggtaaagcatcctctttctatttacaagcca
gacaaacgaggtgaaggatggttaaaaattaaaccagagtatgttgatgaattgatggac
aaactggacatcttgattgtcggaggctattggggtaaaggttcacggggtggaatgatg
tctcattttttgtgtgctgtggcagagaagcccacttctggggaaaaaccatcagtgttt
catactctctgtcgtgttggctcaggttacaccatgaaagaactgtatgacctgggtttg
aaattggccaaacactggaagccttttcacaagaaggctccgcccagcagcattttatgt
ggaacagagaagccagaggtgtacattgaaccttgccactcggtcattgttcaggttaag
gccgcagagatcgtccccagtgacatgtataaaactggctgcacgttgcgttttccacga
attgaaaagataagagaagacaaagagtggcatgagtgcacaaccctggatgagctggag
caacttcgggggcaagcatctggaaagctcgcatctaaacaccttcacataggtggtgat
gacgaaccgcaagagaaaaagcgcaaagctgcccccaaggttaagaaagtcattggaatt
atcgagcacctaaaagcacctaacctctctaacataagcaaagtttctaatatatttgaa
gatgtggagttttgtgttatgagtggaacagacggccacccaaagcctgatctggagaac
agaattgcagaatttggtggttacatagtacagaatccaggcccagacacatactgcgtg
atcgcaggggctcagaacattagagtgaaaaacataatttcttcaaataagcatgatgtc
gtcaagcctgagtggcttttagagtgtttccagaccaaacgctgtgtgccctggcagcct
cgcgtcatgattcacatgtgcccatcaacaagagagcattttgcccgagagtatgactgc
tatggtgatagttactttgttgacacagatttgaatcaactgaaggaagtattctcagga
attaaagatcctagggaacagactcctggagagatggccgctgtgatcgctgacttagaa
caccgctattcctgggacagctctcatctcagtatgtttcgaagccacactgtttatttg
gacttgtacactgttattaatgacttaagtaccaaaatcgagggaacaagattagctata
acagccttggagcttcgatttcatggagcaaaagtggtttcttgtttagccgagggcgtg
tcacacgtaatcgttggggaagatcgtagtcgtgttgcagattttaaagcttttcgaaga
gctcttaagagaaagtttaaaatcctacaagaatgttgggtaactgaatcaatagacaag
tgtgaattacaggaggaaaatcaatatttggtttaa

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