Clostridioides difficile R20291: CDR20291_0712
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Entry
CDR20291_0712 CDS
T00998
Name
(GenBank) penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
cdl
Clostridioides difficile R20291
Pathway
cdl00550
Peptidoglycan biosynthesis
cdl01100
Metabolic pathways
cdl01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
cdl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CDR20291_0712
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CDR20291_0712
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cdl01003
]
CDR20291_0712
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cdl01011
]
CDR20291_0712
Enzymes [BR:
cdl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
CDR20291_0712
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CDR20291_0712
Glycosyltransferases [BR:
cdl01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
CDR20291_0712
Peptidoglycan biosynthesis and degradation proteins [BR:
cdl01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
CDR20291_0712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Peptidase_S11
Sm_multidrug_ex
Motif
Other DBs
NCBI-ProteinID:
CBE02705
UniProt:
A0A9R0CDP1
LinkDB
All DBs
Position
complement(878932..881625)
Genome browser
AA seq
897 aa
AA seq
DB search
MNNDNDKNGNKIRRKKVSSSGNTNKPINRTSANKTRSTKNKKKSKKSDKFKKLRVFGIVF
LVLLVVGTAGTAGLVFASLRDVTPVTEAVLDKQTNQTTTIKYANGKTLSTAPSVNKKTPV
PLDKISPYLQHAVIAIEDERFYEHKGVDIKGLFRSVLKTLTGTKQGGSTIPMQVSKMLLT
TEQQTIPRKIKDIYYAHEMSKTVSKDKILETYLNNFFVGRGLAGAEAGARGYFDKSAADL
TLAESALLAGSTKNPSRFSAYKTSKLEGNETKEDLENKLLFFVNTTDDDLDDPTQVDFDM
IEKIKSWELISNDTYRQLKAGTLVVRKAVSNPEAKKRQEIVLKKMLELKYIKQSEYDEAI
KAKIEIKLPQSSDKVSSSVEDLIESEVINALMEQGHTNDEAQNLFYNGGLIVNTTIDPKM
QDALEEEFDRNSNFPGHMVGPDGVSQPQAAMVILDYKNGEIRALAGGRNISGRKTLNRAT
NPHQPGSSIKPLAIYTPAIDTLKITQSTALSDSRGGYKFEENNKWNPRTTTAGHGSMSLR
KALAKSSNTIAVKTAEMLGDSYDECVDIMMDYLKNFGITTLKNNHSGSSEASDRKFPSLT
LGGMANGITPLQMAAAYGTLANQGVYVEPSIFTTITTFDGQLLVKNAPEEHKVVDPEVAY
VVTDMLESVITEGTGGVATLPKGMPVAGKTGTTNSAYDAWFVGYTPYYVGATYIGDDAGR
KDDSGNTIKRREVPHGSTSTAKLWEKIMEKIHANLTVTEFEVPKNVYFTKINLEDGGKQS
SGSKAAFIEGTAPTKVSSQPSSEDTKKPDNNQPEENNNNNNNTGDNGGGSTPPDNGGNNG
GGSTTPPDNGGNNGGGSTTPPDNGGNNGGGSTTPPDNGGNNGGGSTTPPDGGGTPAT
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgataatgataaaaatggaaataaaatcaggagaaaaaaagttagctcatct
ggtaatacaaataaaccaattaatagaacttcagctaacaagactcgttcaacaaaaaac
aagaaaaaatctaaaaaaagcgataaatttaaaaaactaagagtatttgggatagtattt
ttagttttactagttgttggtacagcaggtactgctggtctagtatttgcgtcactaaga
gatgtaactccagttacagaagctgttttagataaacagacgaaccaaacaactactatt
aaatacgctaatggaaaaacattgtctacagctccaagtgtaaataaaaagacacccgtt
ccattagataagatttccccttatcttcaacatgctgtaattgcaatagaagatgagcgt
ttttatgagcataagggtgtcgatattaaaggtttatttaggtcagtattaaagaccctt
acaggtactaagcaaggtggtagtactattcctatgcaggtatccaaaatgctgttaaca
actgaacagcaaactatacctcgtaaaataaaggatatttactatgcacatgagatgagt
aaaacagtaagtaaagataaaatactagaaacttatttaaataacttcttcgttggtaga
ggtctagcaggtgctgaggctggtgcacgtggttattttgataagtctgcagctgacctc
actctagcagagtcagcacttcttgctggttcaactaaaaatccatcaagattttcagcc
tataaaacttctaagttagagggaaatgaaactaaggaggatttagaaaataaattatta
ttttttgttaacacaactgatgatgatttagatgaccctactcaagtggactttgatatg
attgaaaaaataaaatcttgggagcttatatctaatgatacttatagacaattaaaagca
ggtacattagttgttagaaaggctgtaagtaaccctgaagctaaaaaaagacaagaaatt
gttttaaagaaaatgttagaattgaaatatataaaacaaagtgaatatgatgaagcaatc
aaagctaaaatagaaataaaattgcctcaatcatcagataaagtttcttcatctgtagaa
gaccttatcgaaagtgaagttataaatgctttaatggaacaaggacatacaaatgatgaa
gctcaaaacttattctacaatggtggtctaattgtaaacacaactatagaccctaaaatg
caagatgctttagaagaagaatttgatagaaatagcaatttcccaggacatatggtcggc
cctgatggagttagccaaccacaagctgcaatggtaatcttagattataaaaatggtgaa
ataagagcactagctggaggaagaaatataagtggtagaaaaactttgaatcgtgctact
aaccctcatcagccaggttcttctataaaacctttagcaatatatacacctgctattgat
accctaaaaataacacaatcaactgctctaagtgattctcgaggaggatataagtttgaa
gaaaataataaatggaatccaagaactactactgctggtcatggttctatgagtttacgt
aaagcacttgctaaatcttcaaacacgatagctgtcaaaactgctgaaatgcttggagac
tcttatgatgaatgtgtagatataatgatggattacttaaagaactttggtataacaact
ttaaagaataatcactcaggttcatctgaagcaagtgatagaaaattcccatcattgaca
ctaggtggtatggcgaatggtattactccacttcaaatggctgctgcttatggtacattg
gcaaatcaaggtgtttatgtagaaccttctatttttactactataactacctttgatggt
caattattagttaaaaatgctcctgaagaacataaagttgtagaccctgaagtagcttat
gttgttacagatatgttagaaagcgtaattactgaaggtactggtggtgttgctacactt
ccaaagggaatgcctgtagcaggtaaaacaggtactacaaatagtgcatatgatgcttgg
tttgtcggttacactccttattatgttggtgcaacttatattggagatgatgctggtaga
aaagatgattctggtaacactataaaacgtagagaagtaccacatggaagtactagtact
gcaaaactatgggaaaaaattatggaaaaaatacatgctaatttaacggttactgaattt
gaagttcctaaaaatgtatattttacaaaaattaatttagaggatggaggaaagcaatct
tctggctctaaagcagcatttattgaaggtactgctcctactaaagtaagttctcaacca
tcatctgaagatacaaaaaaaccagacaataaccaaccagaagaaaataataataacaat
aataacacaggtgataatggtggcggttctactcctcctgataatggcggaaacaatggt
ggtggctctactactcctcctgataatggcggaaacaatggtggtggctctactactcct
cctgataatggcggaaacaatggtggtggctctactactcctcctgataatggtggaaat
aatggtggtggctctactactcctcctgatggtggtggaactccagcaacttaa
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