Clostridioides difficile R20291: CDR20291_0971
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Entry
CDR20291_0971 CDS
T00998
Name
(GenBank) putative cell wall hydrolase
Organism
cdl
Clostridioides difficile R20291
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_3
NLPC_P60
SH3_4
SH3_16
SH3_1
GW
Peptidase_C92
Amidase_5
Methyltranf_PUA
LRAT
DUF1175
Motif
Other DBs
NCBI-ProteinID:
CBE03160
UniProt:
P0DX27
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Position
1189678..1190961
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AA seq
427 aa
AA seq
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MIVVKKAIAALGIGAVAVSVSSINASALEKGTVTASALNIRSGPSSDCDKVAKLYKGKTV
EILEKSNGWYKVRVSSSVVGWGSAKYISTSGSSEGTSNQNNPTSSGTTISGNGKVNVSSR
LNVRSGAGTNYSLVGKANNGDVVKLLEQSNGWYKIKLSNGVTGWASSQYISKTSEDVGTN
NSSNSNSTNNSDKKPSSEESIEGKNGKVTSAVSLNVRSGPGTSYSIIGKLNGGDVVELKS
KNNGWYKVKLSSGTIGWVSASYISETNEGTKEKPNSSSNQNSQSNSNSKPSFTGNSDKST
AKGSTIVDFAYTLIGIPYQWGASGPDKFDCSGFTQYVFKHSVGVSIPRVSREQANFGSAI
SMGNYAPGDLVYFDTDGDGTTNHVGIYVGNSKFIHCSGTQTNPNKVKVDNLTSSYWSKVL
LGARRFV
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtgatagtagtgaagaaagctatagcagctttaggaattggggcagtagcagtatctgtt
agctccataaatgcaagtgctcttgaaaagggaacagtaacagcaagtgccttgaatata
agaagtggaccaagttctgattgtgataaggtagcaaaattatacaagggaaaaactgta
gagattttagaaaagtctaatggatggtataaagtaagggtatcgagttctgttgttgga
tggggaagcgcaaaatacatatcaacaagtggttcatctgaaggtacatcaaatcaaaat
aatccaacttcaagtgggacaactattagtggaaatggtaaagtaaatgtgagttctaga
ctgaatgtaagaagtggtgcaggtactaactattcattagttggtaaagcaaataatgga
gatgtagtaaagttactagaacaaagcaatggatggtataaaataaaactatcaaatgga
gttactggatgggctagtagccaatatatctctaaaacatcagaggatgttggaacgaat
aattctagtaattcaaatagtactaataattctgataaaaaaccatctagcgaagaatca
attgaaggcaagaatggtaaggtaacatctgctgtgagtttaaatgtaagaagtggtcct
gggacaagctattctataataggaaaattaaatggtggagatgttgttgaattaaaatcc
aaaaataatggttggtataaggtaaagttatcgagtggaacaattggatgggtgagtgcc
agttatatttctgagactaatgaaggtacaaaagaaaaaccaaattcatcatctaaccaa
aattctcaatctaatagtaactcaaagccatcatttactggaaattcagataaatctaca
gcaaaaggttcaacaatcgtagattttgcatatactcttattggaataccatatcaatgg
ggagcttcaggacctgataaatttgactgttctggatttacacagtatgtttttaaacat
tctgtaggcgtttctattcctagagtttctagagaacaggctaattttggaagtgcaatt
tctatggggaattatgcaccaggagatttagtttattttgacactgatggtgatggaaca
actaatcatgtaggtatatatgtaggaaatagtaaatttatccattgtagtggtactcag
actaatcctaataaggttaaagtggataatttaactagttcatattggtctaaagtatta
cttggtgcaagaagatttgtttag
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