Cronobacter dublinensis: AFK67_00290
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Entry
AFK67_00290 CDS
T04061
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cdm
Cronobacter dublinensis
Brite
KEGG Orthology (KO) [BR:
cdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cdm03032
]
AFK67_00290 (gyrB)
03400 DNA repair and recombination proteins [BR:
cdm03400
]
AFK67_00290 (gyrB)
Enzymes [BR:
cdm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AFK67_00290 (gyrB)
DNA replication proteins [BR:
cdm03032
]
Prokaryotic type
DNA Topoisomerases
AFK67_00290 (gyrB)
DNA repair and recombination proteins [BR:
cdm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AFK67_00290 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
GyrB_hook
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ALB65013
LinkDB
All DBs
Position
55157..57571
Genome browser
AA seq
804 aa
AA seq
DB search
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKDIV
VTIHADNSVSVSDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSQKLELVIRREGKIHQQTYVHGVPQAPLAVTGDTEQTGTQVRFWPSHETFTNVT
EFEYEILAKRLRELSFLNSGVSIRLVDKRDGKQDHFHYEGGIKAFVEYLNKNKTPIHPNI
FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE
GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAEY
LLENPSDAKIVVGKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQERDPAHSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHVYIAQPPLYKVKKG
KQEQYIKDDEAMDQYQIAIALDGATLHTNASAPAIAGEVLEKLVSEYNGAQKMINRMERR
YPRALLKELVYQPTLTEETLADEANVTRWVSALITTLNENEQHGSVWKYDIRENAETRRF
EPVVRVRTHGVDTDYVLDHEFVTGGEYRRLCTLGEKLRGLIEEDAFIERGERRQPVASFE
QALDWLVKESRRGLAIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTTL
MGDAVEPRRAFIEENALKAANIDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattcttatgactcctccagtatcaaagtcctgaaagggctggatgcggtgcgt
aagcgcccgggtatgtatatcggcgatacggatgacggcaccggtctgcaccacatggta
ttcgaggtggtagataacgctatcgacgaagcgctcgcgggtcactgtaaagatatcgtc
gtgaccatccatgccgacaactctgtctcggtatcggatgacgggcgcggcattccgacc
ggtattcacccggaagaaggcgtttcggcggcggaagttatcatgaccgttctgcacgcg
ggcggtaaatttgacgataactcctataaagtctccggcggtctgcacggcgtaggcgta
tccgtagtgaacgccctgtcgcagaaactggaactggtgattcgccgcgaaggcaagatc
caccagcagacttacgtgcacggcgtgccgcaagcgccactggccgtgaccggcgatacc
gaacagaccggtacgcaggttcgcttctggccaagccacgaaacctttaccaacgtcact
gaatttgaatatgaaatcctggcgaagcgcctgcgcgagctctcgttcctgaactccggc
gtctcgattcgtcttgtggataaacgcgacggcaaacaggatcacttccattacgaaggc
ggcatcaaggcgtttgttgagtacctcaacaagaacaaaacgcctatccacccgaacatt
ttctatttctccaccgagaaagatggtattggcgtggaagtggcgctgcagtggaatgac
ggtttccaggaaaacatctactgctttaccaacaacattccgcagcgcgacggcggtacg
cacctcgcgggtttccgcgcagcgatgacccgtacgctgaacgcgtatatggataaagaa
ggctacagcaaaaaagcgaaagtcagcgccaccggcgatgatgcgcgcgaagggctgatt
gccgtggtatccgtgaaagtgccggacccgaaattctcctcccagaccaaagacaaactg
gtctcctccgaggtgaaatcggcggttgagcaacagatgaacgaactgctggcggaatac
ctgctggagaacccgtctgatgcgaaaatcgtggtcggcaaaattatcgacgccgcgcgc
gcccgtgaagcggcacgcaaagcccgtgagatgacccgtcgtaaaggcgcgctggatctc
gccggcctgccgggcaagctagcggattgccaggagcgcgacccggctcactctgaactc
tacctggtggaaggggactccgcgggcggttctgcaaaacagggccgtaaccgtaagaat
caggcgatcctgccgctgaaagggaaaatcctgaacgtggagaaagcgcgctttgacaaa
atgctctcttcccaggaagtcgcgacgctgattaccgcgcttggctgcggcatcggccgt
gacgaatacaacccggataagctgcgctatcacagcatcatcatcatgaccgatgcggac
gtcgacggctcgcacatccgtacgctgctgttgaccttcttctatcgtcagatgccggaa
atcatcgagcgcggccacgtctatatcgctcagccgccgctgtataaagtgaagaaaggc
aagcaggaacagtatattaaagacgacgaggcgatggatcagtatcagatagccatcgcg
ctggacggcgcgacgctgcatacgaatgcgagcgcgccagctatcgccggcgaagtgctg
gagaaactggtgtctgagtacaacggcgcgcagaagatgatcaaccgtatggagcgtcgc
tacccgcgcgcgctgctgaaagagctggtctatcagccgacgctgacggaagagacgctg
gccgatgaagcgaacgtgacccgctgggtttccgcgcttatcaccacgctcaatgaaaac
gagcagcatggcagcgtctggaaatacgacatccgcgaaaacgccgaaacgcgtcgtttc
gagccggtagtgcgcgtgcgtacccacggcgtcgacaccgattacgtgcttgatcacgag
ttcgtgaccggcggcgaataccgtcgtctctgcacgctcggcgagaagctgcgcggcctg
attgaagaagatgcgtttatcgagcgcggcgaacgtcgtcagccggtggcgagcttcgag
caggcgctggactggctggtgaaagagtcccgtcgtggtctcgctatccagcgttataaa
ggtctcggcgagatgaacccggagcagctttgggaaaccacaatggatccggaaagccgt
cgtatgctgcgcgtcaccgtcaaagacgcgattgccgccgaccagcttttcaccacgctg
atgggcgatgccgttgagccgcgccgcgcctttatcgaagaaaacgccctgaaagcggcg
aatatcgatatctga
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